Pairwise Alignments

Query, 256 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 259 a.a., putative ABC transporter - permease subunit from Pseudomonas putida KT2440

 Score =  332 bits (852), Expect = 4e-96
 Identities = 157/251 (62%), Positives = 198/251 (78%)

Query: 6   WTAFCSLLGKEINRFTRIWVQTLVPPAITMTLYFIIFGNLIGSRIGQMNGFSYMEYIVPG 65
           W A  +++ +E+ RF RIW QTL+PPAITM LYF+IFGNLIG +IG M GF+YM+YIVPG
Sbjct: 9   WVALNTIVYREVRRFLRIWPQTLLPPAITMVLYFVIFGNLIGRQIGDMGGFTYMQYIVPG 68

Query: 66  LIMMSVITNSYSNVASSFFSSKFQKNIEELLVAPVPNYVIIAGYVMGGVARGLLVGAMVT 125
           LIMMSVITNSY NV SSFF SKFQ++IEEL+V+PV  + I+ GYV+GGV RGL VG +VT
Sbjct: 69  LIMMSVITNSYGNVVSSFFGSKFQRSIEELMVSPVSPHTILVGYVLGGVLRGLAVGVIVT 128

Query: 126 AVSLLFVDLQVDHWGIIIATVFLTSVVFSLGGLINAVFAKTFDDISIVPTFVLTPLTYLG 185
            +S+ F DLQV H G+ +A V LT+ +FSL G +NAVFA+ FDDISI+PTFVLTPLTYLG
Sbjct: 129 ILSMFFTDLQVHHLGVTVAVVLLTATIFSLLGFVNAVFARNFDDISIIPTFVLTPLTYLG 188

Query: 186 GVFYSISLLPEFWQSVSKINPIVYMVNAFRYGFLGVSDVDIMTSFAVLMAFVVALYCVAH 245
           GVFYSI+LLP FWQ+VS  NP+++MVN+FRYG LGVSD+ I T+   ++     LY V  
Sbjct: 189 GVFYSINLLPPFWQTVSLANPVLHMVNSFRYGILGVSDISIGTAITFMLVATAVLYVVCV 248

Query: 246 YLVTKGKGLRS 256
            L+  G+G+R+
Sbjct: 249 RLLVSGRGMRA 259