Pairwise Alignments

Query, 256 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 280 a.a., ABC transporter permease protein from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 65.5 bits (158), Expect = 1e-15
 Identities = 63/250 (25%), Positives = 120/250 (48%), Gaps = 21/250 (8%)

Query: 8   AFCSLLGKEINRFTRIWVQ---TLVPPAITMTLYFIIFGNLIGSRI--GQMNGFSYMEYI 62
           A  +++G+E+ RF R   +    LV P +   ++   F N+ G  I         Y  Y+
Sbjct: 21  ALRAVVGRELGRFLRQPTRLGSALVRPLLWFVVFSAGFHNVFGVAIIPPYETYIEYQVYM 80

Query: 63  VPGLIMMSVITNSYSNVASSFFSSKFQKNIEELLVAPVPNYVIIAGYVMGGVARGLLVGA 122
           VPGL+ M  + N   +  S  +  +    +  LL AP+    ++A  ++G     +L  A
Sbjct: 81  VPGLLGMVALFNGMQSSLSMVYDREMGV-MRLLLTAPLARGWLLAFKLLGSTVLSVLQMA 139

Query: 123 MVTAVSLLF-VDLQVDHW-GIIIATVFLTSVVFSLGGLINAVFAKTFDDISIVPTFVLTP 180
           +   ++L F V+    H  G+++A     +++ SLG L+ +V+ K  ++ +    FV+ P
Sbjct: 140 VFLLIALAFGVEPAWAHLPGLLLAMACAAAMLASLG-LVLSVYVKQLENFAGTMNFVIFP 198

Query: 181 LTYLGGVFYSISLLPE---FW-QSVSKINPIVYMVNAFRYGFLGVSDVDIMTSFAVLMA- 235
           + ++    Y +  L E   +W   +++ NP  + V A R+  +G  +     ++AVL+A 
Sbjct: 199 MFFISPALYPLWKLEESGAYWLLKIAEFNPFSHAVEAMRFAMMGKFNA---VAWAVLLAC 255

Query: 236 ----FVVALY 241
               FV+AL+
Sbjct: 256 TAVFFVLALW 265