Pairwise Alignments

Query, 256 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 273 a.a., ABC-type multidrug transport system, permease component from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 62.8 bits (151), Expect = 7e-15
 Identities = 57/248 (22%), Positives = 106/248 (42%), Gaps = 27/248 (10%)

Query: 23  IWVQTLVPPAI----TMTLYFIIFGNLIGSRIGQMN--------GFSYMEYIVPGLIMMS 70
           +W +  +P  +       ++ + FG  +G+ +GQ+N           Y+ ++  G I MS
Sbjct: 29  VWRKLAIPSLVGNIAEPLMWLVAFGYGMGALVGQVNLGTPQGSVAVPYILFLASGSICMS 88

Query: 71  VITN-SYSNVASSFFSSKFQKNIEELLVAPVPNYVIIAGYVMGGVARGLLVGAMVTAVSL 129
            +   S+  + S+F     QK  + ++ APV    ++   ++    + L     VTA+  
Sbjct: 89  AMNAASFEALYSAFSRMHVQKTWDGIMNAPVSLDDVVLAEMLWAGFKALFT---VTAILG 145

Query: 130 LFVDLQVDH-------WGIIIATVFLTSVVFSLGGLINAVFAKTFDDISIVPTFVLTPLT 182
           + + L + H       W +++       + FS   L+    AK +D  +   T  LTP+ 
Sbjct: 146 VMLALGISHSPKLLLAWPVLLGV----GITFSCIALVFNALAKGYDFFTYYFTLFLTPMM 201

Query: 183 YLGGVFYSISLLPEFWQSVSKINPIVYMVNAFRYGFLGVSDVDIMTSFAVLMAFVVALYC 242
           +L GVF+    LP   + +S   P+   V   R  F+           +VL+A+ VA + 
Sbjct: 202 FLSGVFFPREQLPGVVRQISDWLPLTNAVELVRPLFMDQWPTQAWLHASVLLAYTVAAFW 261

Query: 243 VAHYLVTK 250
           +A  L  K
Sbjct: 262 LALALTRK 269