Pairwise Alignments

Query, 256 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 255 a.a., ABC-type multidrug transport system, permease component from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  185 bits (470), Expect = 7e-52
 Identities = 89/240 (37%), Positives = 147/240 (61%)

Query: 16  EINRFTRIWVQTLVPPAITMTLYFIIFGNLIGSRIGQMNGFSYMEYIVPGLIMMSVITNS 75
           E+ R  R   Q+++ P +T +LYFI+FG  IGSR+G ++G +Y  +I+PGL+M+S+++ S
Sbjct: 15  EMARTFRTITQSILAPVLTTSLYFIVFGTAIGSRMGDIDGVTYGAFIIPGLVMLSLLSES 74

Query: 76  YSNVASSFFSSKFQKNIEELLVAPVPNYVIIAGYVMGGVARGLLVGAMVTAVSLLFVDLQ 135
            SN +   +  K+   I ELL APV    ++ GYV     + +++G ++   + +FV   
Sbjct: 75  ISNASFGIYMPKWSGTIYELLSAPVSWIEVLLGYVGAAATKSVMLGLLILLTARVFVPYH 134

Query: 136 VDHWGIIIATVFLTSVVFSLGGLINAVFAKTFDDISIVPTFVLTPLTYLGGVFYSISLLP 195
           + H   ++  + LT+V FSL G I  ++A  F  + ++P  V+TPLT+LGG FYSI++LP
Sbjct: 135 IAHPVWMLGFLLLTAVTFSLFGFIIGLWADNFQKLQVIPLLVVTPLTFLGGAFYSINMLP 194

Query: 196 EFWQSVSKINPIVYMVNAFRYGFLGVSDVDIMTSFAVLMAFVVALYCVAHYLVTKGKGLR 255
             WQ+VS +NP+VY+++ FR+ F GV+DV I  S  + + F+        ++   G  LR
Sbjct: 195 PLWQTVSLVNPVVYLISGFRWAFYGVADVHIAVSTGMTLVFMALCLGFIWWVFRTGYKLR 254