Pairwise Alignments

Query, 256 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 256 a.a., ABC-type multidrug transport system, permease component from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  375 bits (964), Expect = e-109
 Identities = 179/256 (69%), Positives = 218/256 (85%)

Query: 1   MYQIYWTAFCSLLGKEINRFTRIWVQTLVPPAITMTLYFIIFGNLIGSRIGQMNGFSYME 60
           M Q+YW A  S+  KEI+RF RIWVQTLVPP ITMTLYFIIFGNLIGSRIG+M+GFSYM+
Sbjct: 1   MMQLYWVALKSIWAKEIHRFMRIWVQTLVPPVITMTLYFIIFGNLIGSRIGEMHGFSYMQ 60

Query: 61  YIVPGLIMMSVITNSYSNVASSFFSSKFQKNIEELLVAPVPNYVIIAGYVMGGVARGLLV 120
           +IVPGLIMM+VITNSY+NVASSFFS+KFQ+NIEELLVAPVP +VIIAG+V GGVARGL V
Sbjct: 61  FIVPGLIMMAVITNSYANVASSFFSAKFQRNIEELLVAPVPTHVIIAGFVGGGVARGLCV 120

Query: 121 GAMVTAVSLLFVDLQVDHWGIIIATVFLTSVVFSLGGLINAVFAKTFDDISIVPTFVLTP 180
           G +VTA+SL FV  QV  W  +  T+ LT+++FSL GL+NAVFAKTFDDIS++PTFVLTP
Sbjct: 121 GILVTAISLFFVPFQVHSWVFVALTLILTAILFSLAGLLNAVFAKTFDDISLIPTFVLTP 180

Query: 181 LTYLGGVFYSISLLPEFWQSVSKINPIVYMVNAFRYGFLGVSDVDIMTSFAVLMAFVVAL 240
           LTYLGGVFYS++LLP FWQ +S +NPIVYM++ FRYGFLG+ DV ++T+F VL+ F+ A 
Sbjct: 181 LTYLGGVFYSLTLLPPFWQGLSHLNPIVYMISGFRYGFLGIHDVPLVTTFGVLVIFIAAF 240

Query: 241 YCVAHYLVTKGKGLRS 256
           Y +   L+ +G+GLRS
Sbjct: 241 YLLCWSLIQRGRGLRS 256