Pairwise Alignments

Query, 256 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 256 a.a., Inner membrane transport permease YadH from Escherichia coli ECRC62

 Score =  375 bits (964), Expect = e-109
 Identities = 180/256 (70%), Positives = 216/256 (84%)

Query: 1   MYQIYWTAFCSLLGKEINRFTRIWVQTLVPPAITMTLYFIIFGNLIGSRIGQMNGFSYME 60
           M  +YW A  S+  KEI+RF RIWVQTLVPP ITMTLYFIIFGNLIGSRIG M+GFSYM+
Sbjct: 1   MMHLYWVALKSIWAKEIHRFMRIWVQTLVPPVITMTLYFIIFGNLIGSRIGDMHGFSYMQ 60

Query: 61  YIVPGLIMMSVITNSYSNVASSFFSSKFQKNIEELLVAPVPNYVIIAGYVMGGVARGLLV 120
           +IVPGLIMMSVITN+Y+NVASSFF +KFQ+NIEELLVAPVP +VIIAGYV GGVARGL V
Sbjct: 61  FIVPGLIMMSVITNAYANVASSFFGAKFQRNIEELLVAPVPTHVIIAGYVGGGVARGLFV 120

Query: 121 GAMVTAVSLLFVDLQVDHWGIIIATVFLTSVVFSLGGLINAVFAKTFDDISIVPTFVLTP 180
           G +VTA+SL FV  QV  W  +  T+ LT+V+FSL GL+N VFAKTFDDIS+VPTFVLTP
Sbjct: 121 GILVTAISLFFVPFQVHSWVFVALTLVLTAVLFSLAGLLNGVFAKTFDDISLVPTFVLTP 180

Query: 181 LTYLGGVFYSISLLPEFWQSVSKINPIVYMVNAFRYGFLGVSDVDIMTSFAVLMAFVVAL 240
           LTYLGGVFYS++LLP FWQ +S +NPIVYM++ FRYGFLG++DV ++T+F VL+ F+VA 
Sbjct: 181 LTYLGGVFYSLTLLPPFWQGLSHLNPIVYMISGFRYGFLGINDVPLVTTFGVLVVFIVAF 240

Query: 241 YCVAHYLVTKGKGLRS 256
           Y +   L+ +G+GLRS
Sbjct: 241 YLICWSLIQRGRGLRS 256