Pairwise Alignments

Query, 256 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 271 a.a., Inner membrane transport permease YadH from Alteromonas macleodii MIT1002

 Score =  359 bits (922), Expect = e-104
 Identities = 177/251 (70%), Positives = 213/251 (84%)

Query: 6   WTAFCSLLGKEINRFTRIWVQTLVPPAITMTLYFIIFGNLIGSRIGQMNGFSYMEYIVPG 65
           + A  ++  KE  RF RIWVQTLVPPAITM+LYF+IFG+LIG+RIG+M GF+YME+IVPG
Sbjct: 21  YVALTTIWIKECTRFLRIWVQTLVPPAITMSLYFVIFGSLIGNRIGEMGGFTYMEFIVPG 80

Query: 66  LIMMSVITNSYSNVASSFFSSKFQKNIEELLVAPVPNYVIIAGYVMGGVARGLLVGAMVT 125
           LIMMSVITNSY+NV+SSFFS+KFQ+NIEELLV+PVP  VII GYV GGVAR +L+G +VT
Sbjct: 81  LIMMSVITNSYANVSSSFFSAKFQRNIEELLVSPVPTSVIILGYVGGGVARAILIGIIVT 140

Query: 126 AVSLLFVDLQVDHWGIIIATVFLTSVVFSLGGLINAVFAKTFDDISIVPTFVLTPLTYLG 185
            VSL FVD+Q+ + GII  T+ LTS +F+  GLINAVFAKTFDDIS+VPTFVLTPLTYLG
Sbjct: 141 LVSLFFVDVQIHNLGIIALTLLLTSTLFATAGLINAVFAKTFDDISVVPTFVLTPLTYLG 200

Query: 186 GVFYSISLLPEFWQSVSKINPIVYMVNAFRYGFLGVSDVDIMTSFAVLMAFVVALYCVAH 245
           GVFYS++LLPEFWQ VSK NP+VYMVN FRYGFLGVSDV++  S A+L+ F   L+ VA+
Sbjct: 201 GVFYSLTLLPEFWQWVSKANPVVYMVNGFRYGFLGVSDVNVTLSLALLVGFNALLFGVAY 260

Query: 246 YLVTKGKGLRS 256
           YL+  GKG+RS
Sbjct: 261 YLLKTGKGIRS 271