Pairwise Alignments

Query, 305 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 309 a.a., Efflux ABC transporter, ATP-binding protein from Sphingobium sp. HT1-2

 Score =  247 bits (630), Expect = 3e-70
 Identities = 129/299 (43%), Positives = 193/299 (64%), Gaps = 5/299 (1%)

Query: 3   ALEIEQLRKTYAGGFEALKGISLQVKKGDFYALLGPNGAGKSTTIGIISSLVNKTSGKVT 62
           A+EI  L K Y GG  AL GI+L + +G  Y LLGPNGAGKSTTI I++ LVNKTSG  +
Sbjct: 9   AIEIRDLTKVYKGGKRALDGINLSIPRGQIYGLLGPNGAGKSTTINILAGLVNKTSGSAS 68

Query: 63  VFGYDLDSQLELAKQKLGLVPQEFNFNPFETVEQIVLQQAGYYGVPKALAKERAKKYLTQ 122
           ++G+D+D+    AK  +G+VPQE  F+PF T  + +  QAGYYGVPK   + R+ + L  
Sbjct: 69  IWGFDIDANPRNAKNSIGIVPQEIVFDPFFTPFETLENQAGYYGVPKD--RRRSMELLRA 126

Query: 123 LDLWEKRSERARNLSGGMKRRLMIARALMHEPQLLILDEPTAGVDIELRRSMWEFLKQIN 182
           + L +K +  AR LSGGMKRRL++A+A++H P +L+LDEPTAGVD++LR+ +W ++K++N
Sbjct: 127 VHLEDKANAYARTLSGGMKRRLLVAKAMVHSPPILVLDEPTAGVDVQLRQQLWAYVKELN 186

Query: 183 AQGVTIILTTHYLEEAEMLCRHIGIIQRGELIENTTMKSLLGKLHVETFVLDVDGNAPIA 242
           A GVTI+LTTHYLEEAE LC  IGII  G +I +   + L+     +   + VD +    
Sbjct: 187 AMGVTIVLTTHYLEEAEELCDRIGIINHGRVITDKPTRELIAMAQEKVVQVTVDRDIAAP 246

Query: 243 PLQGVVKQQMV--EGSLEIELEKSQ-GINHVFTQLTEQGVKVLSMRNKVNRLEELFVSI 298
           P     ++  +  E +L I   K++     V + +   G+ ++ +  +   LE++F+++
Sbjct: 247 PSDPSFEKVELTDERTLTITYMKNRANAGQVLSAVQAGGLAIVDVVTRDPDLEDVFLNL 305