Pairwise Alignments

Query, 305 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 310 a.a., Efflux ABC transporter, ATP-binding protein from Sphingobium sp. HT1-2

 Score =  232 bits (592), Expect = 7e-66
 Identities = 129/307 (42%), Positives = 191/307 (62%), Gaps = 10/307 (3%)

Query: 4   LEIEQLRKTYAGGFEALKGISLQVKKGDFYALLGPNGAGKSTTIGIISSLVNKTSGKVTV 63
           +EI+ L K+YA GF+ALKG+ L +++G+ +ALLGPNGAGK+T I II + V  + G VTV
Sbjct: 5   IEIKGLTKSYASGFQALKGVDLNIEEGEIFALLGPNGAGKTTMISIICANVRPSGGTVTV 64

Query: 64  FGYDLDSQLELAKQKLGLVPQEFNFNPFETVEQIVLQQAGYYGVPKALAKERAKKYLTQL 123
            G+D+      A+  +GLVPQE N + FE V   V    G +G P+  A    +K L  L
Sbjct: 65  AGHDIIRDYRGARAAIGLVPQELNTDQFERVIDTVTFSRGLFGKPRNDAY--VEKVLRDL 122

Query: 124 DLWEKRSERARNLSGGMKRRLMIARALMHEPQLLILDEPTAGVDIELRRSMWEFLKQINA 183
            LW+KR  + R LSGGMKRR+MIA+AL HEP++L LDEPTAGVD+ELRR MW+ + ++  
Sbjct: 123 SLWDKRHNKIRELSGGMKRRVMIAKALSHEPRVLFLDEPTAGVDVELRRDMWKLIGELRQ 182

Query: 184 QGVTIILTTHYLEEAEMLCRHIGIIQRGELI---ENTTMKSLLGKLHVETFVLDVDGNAP 240
            GVTIILTTHY+EEAE +   +G+I  G+L+   + T +   LGK  +   + +     P
Sbjct: 183 TGVTIILTTHYIEEAEEMADRVGVINHGQLMLVEDKTALMEKLGKKTLSIMLAEPIEALP 242

Query: 241 --IAPLQGVVKQ--QMVEGSLEIELEKSQGINHVFTQLTEQGVKVLSMRNKVNRLEELFV 296
             +A     +K   Q +E   +   E++ G++ +  +L + G+    +  + + LE++FV
Sbjct: 243 PELADWDVALKAQGQEIEYLFDTRAERT-GVSSLLRKLGDLGIGYKDLNTRQSSLEDIFV 301

Query: 297 SIVNSGK 303
           S+V+  K
Sbjct: 302 SLVHQEK 308