Pairwise Alignments

Query, 288 a.a., rRNA (cytidine-2'-O-)-methyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 294 a.a., 16S rRNA 2'-O-ribose C1402 methyltransferase from Pseudomonas putida KT2440

 Score =  310 bits (793), Expect = 3e-89
 Identities = 161/272 (59%), Positives = 202/272 (74%), Gaps = 1/272 (0%)

Query: 14  LYIVPTPIGNLGDITQRALDVLASVDMIAVEDTRHTGKLLAHFNISTKTFALHDHNEQQK 73
           LY+V TPIGNL D++ RAL VLA V +IA EDTRH+ +LL HF I T   A H+HNE+ +
Sbjct: 18  LYVVATPIGNLDDMSARALKVLADVALIAAEDTRHSIRLLQHFGIDTPLAACHEHNERDE 77

Query: 74  AQVLVDKLLSGLSIALVSDAGTPLISDPGYHLVTQCRQAGVKVVPLPGPCAVITALSASG 133
               + KLL+G ++ALVSDAGTPLISDPGYHLV Q R AGV VVP+PG CA+I ALSA+G
Sbjct: 78  GGRFLSKLLAGENVALVSDAGTPLISDPGYHLVRQARAAGVSVVPVPGACALIAALSAAG 137

Query: 134 LPSDSFSFEGFLPAKSKARKDKLLEIAKVSRTCIFYESPHRICESLQDMLDVLGGEREVV 193
           LPSD F FEGFLPAK   R+ +L ++ +  RT IFYE+PHRI E L+DM  V GG+R  +
Sbjct: 138 LPSDRFIFEGFLPAKQAGRRARLEQVREEPRTLIFYEAPHRILECLEDMEAVFGGDRPAL 197

Query: 194 LARELTKTFETIQGMPLAELITWIAEDDNRKKGEMVLLVHGY-RDAGEQQLPDEALRTLT 252
           LARELTKTFET++G+PLAEL  ++A D N+++GE V+LV G+    GEQ +  EA R L 
Sbjct: 198 LARELTKTFETLKGLPLAELRAFVAGDSNQQRGECVVLVGGWSAPEGEQAISAEAQRVLD 257

Query: 253 ILTKELPLKKAAALVAEIHQLKKNALYKWGLE 284
           +L  ELPLK+AAAL AEI  ++KN LY+  LE
Sbjct: 258 LLLAELPLKRAAALAAEITGVRKNLLYQLALE 289