Pairwise Alignments

Query, 288 a.a., rRNA (cytidine-2'-O-)-methyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 324 a.a., 16S rRNA (cytidine(1402)-2'-O)-methyltransferase from Magnetospirillum magneticum AMB-1

 Score =  202 bits (515), Expect = 6e-57
 Identities = 120/255 (47%), Positives = 156/255 (61%), Gaps = 4/255 (1%)

Query: 14  LYIVPTPIGNLGDITQRALDVLASVDMIAVEDTRHTGKLLAHFNISTKTFALHDHNEQQK 73
           LY+V TPIGNLGDIT RAL+VL   D++A EDTR TG+L+    +       HDHN  + 
Sbjct: 50  LYLVATPIGNLGDITLRALEVLGHADLVACEDTRVTGRLMQLLGLKAPLAPYHDHNADRA 109

Query: 74  AQVLVDKLLSGLSIALVSDAGTPLISDPGYHLVTQCRQAGVKVVPLPGPCAVITALSASG 133
              L+ +L  G  +ALVSDAGTP++SDPG+ LV  C ++ + V  LPG  AV+TAL  SG
Sbjct: 110 RPGLLARLRQGEVVALVSDAGTPMVSDPGFKLVRDCIESDIAVTALPGASAVLTALQLSG 169

Query: 134 LPSDSFSFEGFLPAKSKARKDKLLEIAKVSRTCIFYESPHRICESLQDMLDVLGGEREVV 193
           + S+ F F GFLP+K  AR+  L E+A V  + +FYESPHR  ESL DM+ VL G+R+  
Sbjct: 170 IASERFLFAGFLPSKGAARRAALQELALVPASLVFYESPHRTGESLADMVTVL-GDRQGA 228

Query: 194 LARELTKTFETIQGMPLAELITWIAEDDNRKKGEMVLLVHGYRDAGEQQLPDEALRTLTI 253
           + RELTK  E +    L+EL    AE   R  GE+ ++V G R  G      E    L I
Sbjct: 229 VTRELTKLHEEVVRGSLSELALRFAETPPR--GEVAIVVSGPRAEGGAPQDIEGRLHLEI 286

Query: 254 LTKELPLKKAAALVA 268
             K L +K A+ALVA
Sbjct: 287 -EKGLSIKDASALVA 300