Pairwise Alignments

Query, 288 a.a., rRNA (cytidine-2'-O-)-methyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 287 a.a., rRNA small subunit methyltransferase I from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  377 bits (967), Expect = e-109
 Identities = 191/288 (66%), Positives = 226/288 (78%), Gaps = 1/288 (0%)

Query: 1   MTDNKTVPNGAPILYIVPTPIGNLGDITQRALDVLASVDMIAVEDTRHTGKLLAHFNIST 60
           M  N++  N    L+IVPTPIGNL DITQRAL+VL +VD+IA EDTRHTG LL HF I+ 
Sbjct: 1   MKQNESADNSQGQLFIVPTPIGNLADITQRALEVLQAVDLIAAEDTRHTGLLLQHFGINA 60

Query: 61  KTFALHDHNEQQKAQVLVDKLLSGLSIALVSDAGTPLISDPGYHLVTQCRQAGVKVVPLP 120
           + FALHDHNEQQKA+ LV KL  G +IALVSDAGTPLI+DPGYHLV  CR+AG++VVPLP
Sbjct: 61  RLFALHDHNEQQKAETLVAKLKEGQNIALVSDAGTPLINDPGYHLVRTCREAGIRVVPLP 120

Query: 121 GPCAVITALSASGLPSDSFSFEGFLPAKSKARKDKLLEIAKVSRTCIFYESPHRICESLQ 180
           GPCA I ALSA+GLPSD F +EGFLPAKSK R+D L  I    RT IFYES HR+ +SL+
Sbjct: 121 GPCAAIAALSAAGLPSDRFCYEGFLPAKSKGRRDALKAIETEPRTLIFYESTHRLLDSLE 180

Query: 181 DMLDVLGGEREVVLARELTKTFETIQGMPLAELITWIAEDDNRKKGEMVLLVHGYRDAGE 240
           D++ VLG  R VVLARELTKT+ETI G P+ EL+ W+ ED+NR+KGEMVL+V G++ A E
Sbjct: 181 DIVAVLGESRYVVLARELTKTWETIHGAPVGELLAWVKEDENRRKGEMVLIVEGHK-AQE 239

Query: 241 QQLPDEALRTLTILTKELPLKKAAALVAEIHQLKKNALYKWGLENLGE 288
             LP +ALRTL +L  ELPLKKAAAL AEIH +KKNALYK+ LE   E
Sbjct: 240 DDLPADALRTLALLQAELPLKKAAALAAEIHGVKKNALYKYALEQQEE 287