Pairwise Alignments

Query, 288 a.a., rRNA (cytidine-2'-O-)-methyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 285 a.a., 16S rRNA (cytidine(1402)-2'-O)-methyltransferase from Erwinia tracheiphila SCR3

 Score =  362 bits (930), Expect = e-105
 Identities = 185/273 (67%), Positives = 216/273 (79%), Gaps = 1/273 (0%)

Query: 11  APILYIVPTPIGNLGDITQRALDVLASVDMIAVEDTRHTGKLLAHFNISTKTFALHDHNE 70
           A  LYIVPTPIGNLGDITQRAL+VLA+VD+IA EDTRHTG LL HF I+   FALHDHNE
Sbjct: 9   ASTLYIVPTPIGNLGDITQRALEVLANVDLIAAEDTRHTGLLLQHFAINAHLFALHDHNE 68

Query: 71  QQKAQVLVDKLLSGLSIALVSDAGTPLISDPGYHLVTQCRQAGVKVVPLPGPCAVITALS 130
           QQK + L+ KL  G  IALVSDAGTPLI+DPGYHLV  CR+AG+ VVPLPG CA ITALS
Sbjct: 69  QQKVETLLAKLQDGQRIALVSDAGTPLINDPGYHLVRLCREAGINVVPLPGACAAITALS 128

Query: 131 ASGLPSDSFSFEGFLPAKSKARKDKLLEIAKVSRTCIFYESPHRICESLQDMLDVLGGER 190
           A+GLPSD F +EGFLPAK+K+R D L  + +  RT IFYES HR+  SLQDM+ V G  R
Sbjct: 129 AAGLPSDRFCYEGFLPAKTKSRCDVLRALEQEPRTLIFYESTHRLLYSLQDMVSVWGAGR 188

Query: 191 EVVLARELTKTFETIQGMPLAELITWIAEDDNRKKGEMVLLVHGYRDAGEQQLPDEALRT 250
            VVLARE+TKT+E+I G P+ EL+ W+ ED NR+KGEMVL+V G++ A E  LP EALRT
Sbjct: 189 YVVLAREITKTWESINGAPVGELLAWVQEDKNRRKGEMVLIVEGFQ-AEEDALPPEALRT 247

Query: 251 LTILTKELPLKKAAALVAEIHQLKKNALYKWGL 283
           L +L +ELPLKKAA L AEIH +KKNALYK+ L
Sbjct: 248 LALLQQELPLKKAAQLTAEIHAVKKNALYKYAL 280