Pairwise Alignments

Query, 288 a.a., rRNA (cytidine-2'-O-)-methyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 286 a.a., 16S rRNA (cytidine(1402)-2'-O)-methyltransferase from Escherichia coli ECRC62

 Score =  377 bits (967), Expect = e-109
 Identities = 190/287 (66%), Positives = 227/287 (79%), Gaps = 1/287 (0%)

Query: 1   MTDNKTVPNGAPILYIVPTPIGNLGDITQRALDVLASVDMIAVEDTRHTGKLLAHFNIST 60
           M  +++  N    LYIVPTPIGNL DITQRAL+VL +VD+IA EDTRHTG LL HF I+ 
Sbjct: 1   MKQHQSADNSQGQLYIVPTPIGNLADITQRALEVLQAVDLIAAEDTRHTGLLLQHFGINA 60

Query: 61  KTFALHDHNEQQKAQVLVDKLLSGLSIALVSDAGTPLISDPGYHLVTQCRQAGVKVVPLP 120
           + FALHDHNEQQKA+ L+ KL  G +IALVSDAGTPLI+DPGYHLV  CR+AG+ VVPLP
Sbjct: 61  RLFALHDHNEQQKAETLLAKLQEGQNIALVSDAGTPLINDPGYHLVRTCREAGICVVPLP 120

Query: 121 GPCAVITALSASGLPSDSFSFEGFLPAKSKARKDKLLEIAKVSRTCIFYESPHRICESLQ 180
           GPCA ITALSA+GLPSD F +EGFLPAKSK R+D L  I    RT IFYES HR+ +SL+
Sbjct: 121 GPCAAITALSAAGLPSDRFCYEGFLPAKSKGRRDALKAIEAEPRTLIFYESTHRLLDSLE 180

Query: 181 DMLDVLGGEREVVLARELTKTFETIQGMPLAELITWIAEDDNRKKGEMVLLVHGYRDAGE 240
           D++ VLG  R VVLARELTKT+ETI G P+ EL+ W+ ED+NR+KGEMVL++ G++ A E
Sbjct: 181 DIVAVLGESRYVVLARELTKTWETIHGAPVGELLAWVKEDENRRKGEMVLIIEGHK-AQE 239

Query: 241 QQLPDEALRTLTILTKELPLKKAAALVAEIHQLKKNALYKWGLENLG 287
           + LP +ALRTL +L  ELPLKKAAAL AEIH +KKNALYK+ LE  G
Sbjct: 240 EDLPADALRTLALLQAELPLKKAAALAAEIHGVKKNALYKYALEQQG 286