Pairwise Alignments

Query, 288 a.a., rRNA (cytidine-2'-O-)-methyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 289 a.a., 16S rRNA (cytidine(1402)-2'-O)-methyltransferase from Dickeya dianthicola ME23

 Score =  375 bits (962), Expect = e-109
 Identities = 191/284 (67%), Positives = 227/284 (79%), Gaps = 1/284 (0%)

Query: 1   MTDNKTVPNGAPILYIVPTPIGNLGDITQRALDVLASVDMIAVEDTRHTGKLLAHFNIST 60
           M  ++     A  LYIVPTPIGNL DITQRAL VL  VD+IA EDTRHTG LL HF I+ 
Sbjct: 1   MNQDQQAQISASTLYIVPTPIGNLADITQRALAVLQQVDLIAAEDTRHTGLLLQHFAINA 60

Query: 61  KTFALHDHNEQQKAQVLVDKLLSGLSIALVSDAGTPLISDPGYHLVTQCRQAGVKVVPLP 120
           + FALHDHNEQQKA+ L+ +L  G+SIALVSDAGTPLI+DPGYHLV +CR+AGV+VVPLP
Sbjct: 61  RLFALHDHNEQQKAEQLLARLQQGMSIALVSDAGTPLINDPGYHLVRRCREAGVRVVPLP 120

Query: 121 GPCAVITALSASGLPSDSFSFEGFLPAKSKARKDKLLEIAKVSRTCIFYESPHRICESLQ 180
           GPCA ITALSA+GLPSD F +EGFLPAK+KARKD L +  +  RT IFYES HR+ +SLQ
Sbjct: 121 GPCAAITALSAAGLPSDRFCYEGFLPAKTKARKDTLRDQLEEPRTLIFYESTHRLLDSLQ 180

Query: 181 DMLDVLGGEREVVLARELTKTFETIQGMPLAELITWIAEDDNRKKGEMVLLVHGYRDAGE 240
           DM++V G ER VVLARELTKT+E++ G P+AEL+ W+ EDDNR+KGEMVL+V G+R   E
Sbjct: 181 DMVEVWGPERYVVLARELTKTWESLYGAPVAELLAWVQEDDNRRKGEMVLIVEGHR-PDE 239

Query: 241 QQLPDEALRTLTILTKELPLKKAAALVAEIHQLKKNALYKWGLE 284
           + L   AL TL +L  ELPLKKAAAL AEIH +KKNALY++GLE
Sbjct: 240 EALSAAALHTLQLLRAELPLKKAAALAAEIHGVKKNALYRYGLE 283