Pairwise Alignments

Query, 288 a.a., rRNA (cytidine-2'-O-)-methyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 224 a.a., 16S rRNA (cytidine(1402)-2'-O)-methyltransferase from Bacteroides stercoris CC31F

 Score =  186 bits (472), Expect = 4e-52
 Identities = 98/224 (43%), Positives = 142/224 (63%), Gaps = 3/224 (1%)

Query: 14  LYIVPTPIGNLGDITQRALDVLASVDMIAVEDTRHTGKLLAHFNISTKTFALHDHNEQQK 73
           LY+VPTP+GNL D+T RA+ +L   D++  EDTR +G LL HF I     + H  NE + 
Sbjct: 4   LYVVPTPVGNLEDMTFRAIRILKEADLVLAEDTRTSGILLKHFEIKNAMQSHHKFNEHKT 63

Query: 74  AQVLVDKLLSGLSIALVSDAGTPLISDPGYHLVTQCRQAGVKVVPLPGPCAVITALSASG 133
            + +V+++  G ++AL+SDAGTP ISDPG+ +V +C + G++V  LPG  A + AL ASG
Sbjct: 64  VESVVNRIKGGETVALISDAGTPGISDPGFLVVRECVRNGIEVQCLPGATAFVPALVASG 123

Query: 134 LPSDSFSFEGFLPAKSKARKDKLLEIAKVSRTCIFYESPHRICESLQDMLDVLGGEREVV 193
           LP++ F FEGFLP K K R  +L  +A+  RT +FYESPHR+ ++L    +  G ER+  
Sbjct: 124 LPNEKFCFEGFLPQK-KGRMTRLKGLAEECRTMVFYESPHRLVKALTQFAEYFGSERQAS 182

Query: 194 LARELTKTFETIQGMPLAELITWIAEDDNRKKGEMVLLVHGYRD 237
           ++RE++K  E      L ELI       N  +GE+V++V G  D
Sbjct: 183 VSREISKIHEETVRGTLTELIEHFTA--NEPRGEIVIVVAGIDD 224