Pairwise Alignments

Query, 288 a.a., rRNA (cytidine-2'-O-)-methyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 306 a.a., Ribosomal RNA small subunit methyltransferase I from Azospirillum sp. SherDot2

 Score =  201 bits (510), Expect = 2e-56
 Identities = 125/275 (45%), Positives = 161/275 (58%), Gaps = 11/275 (4%)

Query: 14  LYIVPTPIGNLGDITQRALDVLASVDMIAVEDTRHTGKLLAHFNISTKTFALHDHNEQQK 73
           LY+V TPIGN  DIT RALD L   D IA EDTR T KL+    I T   + H+HN  + 
Sbjct: 31  LYVVATPIGNAADITLRALDTLKRADAIACEDTRVTAKLMGIHGIHTPFVSYHEHNAAKM 90

Query: 74  AQVLVDKLLSGLSIALVSDAGTPLISDPGYHLVTQCRQAGVKVVPLPGPCAVITALSASG 133
             +L+ ++  G +IALV+DAGTPL+SDPGY LV +C   GV V  LPG  A + AL  SG
Sbjct: 91  RPILIGRMKKGEAIALVTDAGTPLVSDPGYKLVRECVAEGVAVTTLPGASAPLVALVLSG 150

Query: 134 LPSDSFSFEGFLPAKSKARKDKLLEIAKVSRTCIFYESPHRICESLQDMLDVLGGEREVV 193
           LP+D F F GFLP KS AR+    E+  V  T +F+ESP R+ ESL D+ D+L G RE  
Sbjct: 151 LPTDRFLFAGFLPNKSSARRATAGELKGVPATLVFFESPQRLPESLADLADIL-GPREAA 209

Query: 194 LARELTKTFETIQGMPLAELITWIAEDDNRKKGEMVLLVHGYRDAGEQQLPDEALRTLTI 253
           +ARELTK +E ++   L EL    AE     +GE+VL++      GE+  P EA   +  
Sbjct: 210 VARELTKLYEEVRRGTLPELAAHYAE-AGPPRGEVVLVI---GPPGEEATPGEA--DVDA 263

Query: 254 LTKE----LPLKKAAALVAEIHQLKKNALYKWGLE 284
           L +E    L ++ AAA VA      K  +Y   LE
Sbjct: 264 LLREALTRLSVRDAAADVAARTGQHKRTVYARALE 298