Pairwise Alignments

Query, 288 a.a., rRNA (cytidine-2'-O-)-methyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 278 a.a., Ribosomal RNA small subunit methyltransferase I from Alteromonas macleodii MIT1002

 Score =  278 bits (712), Expect = 7e-80
 Identities = 145/284 (51%), Positives = 201/284 (70%), Gaps = 9/284 (3%)

Query: 1   MTDNKTVPNGAPILYIVPTPIGNLGDITQRALDVLASVDMIAVEDTRHTGKLLAHFNIST 60
           MTD  T       LYIVPTPIGNL DI+ RA+ VL+ V  IA EDTRH+ +LL HF+I T
Sbjct: 1   MTDTAT-------LYIVPTPIGNLDDISARAIRVLSEVSWIAAEDTRHSARLLQHFSIGT 53

Query: 61  KTFALHDHNEQQKAQVLVDKLLSGLSIALVSDAGTPLISDPGYHLVTQCRQAGVKVVPLP 120
           KT +LH+HNE ++  +L ++L  G S+AL+SDAGTPLISDPG+ LV +CR+ G+ V  LP
Sbjct: 54  KTLSLHEHNEDKRTAMLCERLKGGESVALISDAGTPLISDPGFVLVRKCREQGIPVSALP 113

Query: 121 GPCAVITALSASGLPSDSFSFEGFLPAKSKARKDKLLEIAKVSRTCIFYESPHRICESLQ 180
           GPCA ITALSASGLP+D F FEGFLP K +AR+  L  +   + T ++YE+P RI +++ 
Sbjct: 114 GPCAAITALSASGLPTDKFIFEGFLPVKVQARESVLSALIDRTFTTVYYEAPRRILDTVT 173

Query: 181 DMLDVLGGEREVVLARELTKTFETIQGMPLAELITWIAEDDNRKKGEMVLLVHGYRDAGE 240
           D+  VL G+R++V+A+EL+KTFET       ++I ++  D   +KGE V+++ G     +
Sbjct: 174 DIQRVL-GDRQIVVAKELSKTFETYVSGSAQDVIDYLNADVAHQKGEFVVMI-GPAKVSD 231

Query: 241 QQLPDEALRTLTILTKELPLKKAAALVAEIHQLKKNALYKWGLE 284
           Q +P EA+  L++L + +PLKKAAA+VA  + LKKNALY+ GL+
Sbjct: 232 QAIPSEAMSLLSVLCEHMPLKKAAAVVATHYDLKKNALYQAGLD 275