Pairwise Alignments

Query, 601 a.a., penicillin-binding protein activator from Vibrio cholerae E7946 ATCC 55056

Subject, 605 a.a., putative lipoprotein from Pseudomonas putida KT2440

 Score =  212 bits (539), Expect = 4e-59
 Identities = 164/596 (27%), Positives = 282/596 (47%), Gaps = 19/596 (3%)

Query: 11  RLLTPIALSIVLSACSTQPSSPDVVDITAQPLLTAQTYLMRADASQGNQQNDWL-IMALK 69
           RLLT + L+ +L+AC++ PSS  + ++   P  + +  L +A +S+  +    L + A  
Sbjct: 6   RLLTALCLAALLAACASSPSS-SLGELPRTPDASIEQLLEKAASSKSAEDAALLRLSAAD 64

Query: 70  AAIEENNPDQAQLLIMRLAKQPLTPTQQAQWQLLRAQLLANTEQYQEALEQL---SFQAN 126
            A ++ +  +A  ++ ++    L P QQ     L A+L  +  Q + AL  L   S Q  
Sbjct: 65  LAYKQKDFPRAARILEQVPLDTLKPAQQVFASTLAAELAMSRNQPKAALTALAHPSLQRL 124

Query: 127 WSLPQVQWQQYHQLRADIFTALDRSFDSTRELVALYGLSSNKDKEALADQIWANLNHYSA 186
             LP     + + + A    A  ++  + ++ + L  L   +      D IWA +    A
Sbjct: 125 AELPADLQARTYSVHAAALEADGQALAAAQQRILLAPLLGGQAASTNNDAIWALVASLPA 184

Query: 187 SKIIKLSTEPDEAQLDGWLQLAIYMKTLGSDLPQLKNTLEKWLAENPQHPAAIYTPKAIT 246
            +   L    ++  L GW  LA  +K+ G+ L Q +  +E W+ ++P HPAA   P A+T
Sbjct: 185 EQ---LQQPTNDQTLAGWTSLAFAVKSAGT-LEQQQAAIEAWVKQHPDHPAAQQLPLALT 240

Query: 247 DILALEIVKPTNTALLLPLTGKFAKQAQFIRDGFVFAMMNDADRQTNATLTIIDTNAETL 306
            +  L     T  ALLLP  G  A  A+ +RDGF+ A    A +       +   ++  +
Sbjct: 241 KLKELASQPLTKIALLLPQEGPLAGVARALRDGFMAAHFQ-AQQSGQPAPAVQVFDSSRI 299

Query: 307 ESVDAILTSKQ---IDFVVGPLIKGNIEKLQQFQQSRGQMIPTLALNIPDQIDTTAGACY 363
            S+D      Q   +  V+GPL K  +++L    Q     I TLALN  D         +
Sbjct: 300 GSLDDFYRQAQAAGVQLVIGPLEKPLVKQLAAKPQLP---ITTLALNYADAGQKAPPQLF 356

Query: 364 -LALSPEQEVAQAAKHLFTQGYRYPLILAPQNAYGERVVEAFNEEWRRYSKNKVAVNLFG 422
              L+ E E  + A+     G    + L P   +G+RV+ AF ++W       +A     
Sbjct: 357 QFGLAAEDEAREVARRARADGMVRAVALVPSGEWGDRVLAAFRQDWEGNGGTLLAAERIA 416

Query: 423 DKRQLQRNINSIFGLQDSQQNIAQMESLLGMGLESQPRSRRDIDAVYIVANSSELTLIKP 482
               L + I  +F L+ S+     ++S +G  + +QP  R+DID +++ +   +   IKP
Sbjct: 417 QPVALAQQIADLFQLRQSEGRAKSLQSTVGGSIAAQPSRRQDIDFIFLASTPQQAQQIKP 476

Query: 483 FIEVAINPDTRPPKLFSNSNSNTGG-RQYEDLSGVTYSDIPLLIQPAPSIKEQLTQIWPE 541
            +      D  P    SN  S +G   QY D++G+ + + P L+  + S+++Q+ Q WP+
Sbjct: 477 TLNFQYAGDV-PVYATSNLYSASGDINQYNDMNGIRFCETPWLLDTSNSLRQQVVQQWPQ 535

Query: 542 SSNAERRLQALGMDAYRLMVELPQMKIVEGYTIDGQTGVLSIDEQCVVQREISWAE 597
           ++ +  RL A+G+DAY L   L Q+K +    + G +G LSI+    V+R++ WAE
Sbjct: 536 AAGSLGRLYAMGVDAYSLAPRLGQLKALPDNRVLGLSGSLSINANQRVERQLPWAE 591