Pairwise Alignments

Query, 601 a.a., penicillin-binding protein activator from Vibrio cholerae E7946 ATCC 55056

Subject, 603 a.a., Penicillin-binding protein activator LpoA from Pseudomonas sp. RS175

 Score =  218 bits (556), Expect = 4e-61
 Identities = 162/596 (27%), Positives = 290/596 (48%), Gaps = 21/596 (3%)

Query: 11  RLLTPIALSIVLSACSTQPSSPDVVDITAQPLLTAQTYLMRADASQGNQQNDWL-IMALK 69
           RL + + L+ +L+AC++ PSS  + ++   P  + +  L +A  S+  ++   L + A  
Sbjct: 6   RLFSALCLAALLAACASSPSS-SLGELPRTPDASIEQLLEQAAQSKTPEKAALLRLSAAD 64

Query: 70  AAIEENNPDQAQLLIMRLAKQPLTPTQQAQWQLLRAQLLANTEQYQEALEQLSFQANWSL 129
            A  + N  Q+  ++ ++  + L P QQ     L A+L     Q + AL  LS  +   L
Sbjct: 65  LAYRQGNAGQSAQILQQVPLEQLKPGQQIFASTLSAELAMTRNQPKAALAALSHPSQQHL 124

Query: 130 PQVQWQQYHQ---LRADIFTALDRSFDSTRELVALYGLSSNKDKEALADQIWANLNHYSA 186
            ++  +Q  +   + A    A  ++  + RE + +  L  N+      + IW+ +     
Sbjct: 125 GEMPVEQQIRTGTVHARALEADGQTLAAARERIFIAPLLENEAAAKNHEAIWSLIASLPT 184

Query: 187 SKIIKLSTEPDEAQLDGWLQLAIYMKTLGSDLPQLKNTLEKWLAENPQHPAAIYTPKAIT 246
            ++   +T+     L GWL LA  +KT G+ L Q +  ++ W  +NP+HPAAI  P  + 
Sbjct: 185 DQLQPSTTD----DLGGWLSLARAVKTAGT-LEQQQAAIDSWREQNPKHPAAIQLPTPLV 239

Query: 247 DILALEIVKPTNTALLLPLTGKFAKQAQFIRDGFVFAMMNDADRQTNATLTIIDTNAETL 306
            +  L     +  ALLLP  G+ A  A+ +R+GF+ A         N   +I   ++  L
Sbjct: 240 KLKELASQPLSKIALLLPQNGQLATVAKALREGFMAAHYQAQQAGQNPP-SIQFYDSTNL 298

Query: 307 ESVDAILTSKQID---FVVGPLIKGNIEKLQQFQQSRGQM-IPTLALNIPDQIDTTAGAC 362
            S+D      Q D    VVGPL K  ++++     +R Q+ I TLALN  +         
Sbjct: 299 TSMDEFYRKAQADGVQLVVGPLEKPLVKQIS----TRPQLPITTLALNYSEGEQGPPQLF 354

Query: 363 YLALSPEQEVAQAAKHLFTQGYRYPLILAPQNAYGERVVEAFNEEWRRYSKNKVAVNLFG 422
              L+PE E  + A+     G      + P+  +G+RV++AF+++W+      VA+    
Sbjct: 355 QFGLAPEDEAREVARRARADGLHRAAAMVPKGEWGDRVLKAFSQDWQANGGTIVAIERVD 414

Query: 423 DKRQLQRNINSIFGLQDSQQNIAQMESLLGMGLESQPRSRRDIDAVYIVANSSELTLIKP 482
              QL + I  +F L+ S+     ++S +G  + +QP  R+DI+ +++ +   +   IKP
Sbjct: 415 QPVQLAQQIADMFQLRQSEARAKSLQSTVGTTVAAQPSRRQDIEFIFLASTPQQAQQIKP 474

Query: 483 FIEVAINPDTRPPKLFSNSNSNTGGR-QYEDLSGVTYSDIPLLIQPAPSIKEQLTQIWPE 541
            +      D  P    S   S +G + QY D++G+ + + P L+     +++Q+T  WP+
Sbjct: 475 TLNFQYAGDV-PVYATSQVFSASGDQNQYNDMNGIRFCETPWLLDANDPLRKQVTAQWPQ 533

Query: 542 SSNAERRLQALGMDAYRLMVELPQMKIVEGYTIDGQTGVLSIDEQCVVQREISWAE 597
           +  +  RL A+G DAYRL   L Q+K +    I+G +G L++ +   +QR++ WAE
Sbjct: 534 AGGSLGRLYAMGADAYRLAPRLGQLKTLPDSRIEGLSGSLAVSQSQRIQRQLPWAE 589