Pairwise Alignments

Query, 601 a.a., penicillin-binding protein activator from Vibrio cholerae E7946 ATCC 55056

Subject, 680 a.a., LppC putative lipoprotein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  170 bits (431), Expect = 2e-46
 Identities = 168/680 (24%), Positives = 281/680 (41%), Gaps = 103/680 (15%)

Query: 6   RRSVPRLLTPIALSIVLSACSTQPSSPDVVDITAQPLLTAQTYLMRADASQGNQQNDWLI 65
           R +  R L  +  +++ + C TQ        +       +  YL +   S  + + +W +
Sbjct: 8   RLNAARALPVVLAALLFAGCGTQAPDQSAAYMQGSAQADSAFYLHQMQQSADDSKTNWQL 67

Query: 66  MALKAAIEENNPDQAQLLIMRLAKQPLTPTQQAQWQLLRAQL------LANTEQYQEALE 119
           +A+ A ++E    QA  L  +L  Q L  TQ+ +  LL  ++      +A  +   + L+
Sbjct: 68  LAIHALLKEGKSQQAVDLFNQLP-QNLNDTQRREQSLLAVEIKLAQKDVAGAQALLDKLK 126

Query: 120 QLSFQANWSLPQVQWQQYHQLRADIFTALDR-SFDSTRELVALYGLSSNKDKEALADQIW 178
              F  N        QQ    +A I  +  R S    R L+A   L + KDK+   D  W
Sbjct: 127 PADFAPN--------QQARYWQAQIVASQGRPSLTLLRALIAQEPLLAAKDKQKNIDATW 178

Query: 179 ANLNHYSASKIIKLSTEPDEAQLDGWLQLAIYMKTLGSDLPQLKNTLEKWLAENPQHPAA 238
             L+  +  +   L    DE  L GWL L        +D   LK  +  W    PQ+P A
Sbjct: 179 QALSAMTPDQARTLVINADENVLQGWLDLQRVWFDNRNDPDMLKAGIADWQKRYPQNPGA 238

Query: 239 IYTPKAITDILALEIVKPTNTALLLPLTGKFAKQAQFIRDGF------------------ 280
              P  + ++   +    +  ALLLPL G+ A   + I+ GF                  
Sbjct: 239 KMLPTQLVNVQRFKPASTSKIALLLPLNGQAAVFGRTIQQGFEAAKNLGTQAVEMQPAAA 298

Query: 281 ---------------------------VFAMMNDADRQTNATLTIIDTNAETLES-VDAI 312
                                      V  + +DA  Q+   ++   T   T  +  D  
Sbjct: 299 PDAPVEPGVEETQPQMTNGVASPSQASVSDLTDDAPAQSATPVSAPQTPPATASAPADPS 358

Query: 313 LTSKQIDFVVGPLIKGNIEKLQQFQQSRGQMI--PTLALNIPDQIDTTAGACYLALS-PE 369
              K  D    PL     + L Q QQ    ++  P L  N+   + +      LAL+ PE
Sbjct: 359 AELKIYDTSSQPL----DQVLAQVQQDGASIVVGPLLKNNVEALMKSNTPLNVLALNQPE 414

Query: 370 ----------------QEVAQAAKHLFTQGYRYPLILAPQNAYGERVVEAFNEEWRRYSK 413
                            E   AA H++ QG + PL+L P++A G+RV  AF +EW++   
Sbjct: 415 TVRSFPNICYFALSPEDEARDAAHHIYDQGKQSPLLLIPRSALGDRVANAFTQEWQKLGG 474

Query: 414 NKVAVNLFGDKRQLQRNINSIFGLQDSQQNIAQM------ESLLGMGLESQPRSRR---- 463
             V    FG   +L+  +N   G+  +   +A         ++ G+ + + P   +    
Sbjct: 475 GIVLQQKFGSVAELKMGVNGGAGIALTGSPVAASVPAQPGVTIGGLTIPAPPTDAQITGG 534

Query: 464 -DIDAVYIVANSSELTLIKPFIEVAINPDTRPPKLFSNSNS--NTGGRQYE-DLSGVTYS 519
             +DAVYI+A   E+  IKP I +  N       L+++S S   T G  +  ++ G+ YS
Sbjct: 535 GRVDAVYILATPEEIGFIKPMIAMR-NGTQSGATLYASSRSAQGTSGPDFRLEMEGLQYS 593

Query: 520 DIPLLI-QPAPSIKEQLTQIWPESSNAERRLQALGMDAYRLMVELPQMKIVEGYTIDGQT 578
           +IP+L     P +++ L+ +  + S A  R+ A+G+DA+ L     QM+ V+G+ I+G T
Sbjct: 594 EIPMLAGGNMPLMQQALSAVHNDYSLA--RMYAMGVDAWTLANHFSQMRQVQGFEINGNT 651

Query: 579 GVLSIDEQCVVQREISWAEH 598
           G L+    CV+ R++SW ++
Sbjct: 652 GALTASPDCVINRKLSWLKY 671