Pairwise Alignments

Query, 601 a.a., penicillin-binding protein activator from Vibrio cholerae E7946 ATCC 55056

Subject, 683 a.a., penicillin-binding protein activator from Dickeya dianthicola ME23

 Score =  204 bits (518), Expect = 1e-56
 Identities = 187/677 (27%), Positives = 290/677 (42%), Gaps = 96/677 (14%)

Query: 6   RRSVPRLLTPIALSIVLSACSTQPSSPDVVD--ITAQPLLTAQTYLMRADASQGNQQNDW 63
           R    RL+  +  ++ L+ C +Q          +  +   ++  YL +   S  + + DW
Sbjct: 8   RTHAGRLIPVMLAALFLAGCPSQAPQGTAPQQHVEGKAGASSDYYLQQMQQSGDDSKADW 67

Query: 64  LIMALKAAIEENNPDQAQLLIMRLAKQPLTPTQQAQWQLLRAQLLANTEQYQEALEQLSF 123
            ++A+ A I+E    QA   +  L+ Q L   Q+ + +LL A+L         A   L+ 
Sbjct: 68  QLLAIHALIQEGKLPQANGQLNALSPQ-LNDKQRQEQRLLLAELAVAQNDLNAANSTLAQ 126

Query: 124 QANWSLPQVQWQQYHQLRADIFTALDR-SFDSTRELVALYGLSSNKDKEALADQIWANLN 182
               SL   Q ++Y+Q +  I  A +R S    R  + L  L      +   DQ WA L 
Sbjct: 127 LDVKSLSPQQQERYYQTQ--IKAAQNRPSLTMIRAYIGLEPLLQGDAHQRNIDQTWAALT 184

Query: 183 HYSASKIIKLSTEPDEAQLDGWLQLAIYMKTLGSDLPQLKNTLEKWLAENPQHPAAIYTP 242
             +   +  +    DE  L GWL L    +T       L+  +E W    P+HPAA   P
Sbjct: 185 RLTQQDLGAMVINVDENTLQGWLDLLNLWQTKAQVPTDLQAAIEDWKKRYPRHPAAKQLP 244

Query: 243 KAITDILALEIVKPTNT--------ALLLPLTGKFAKQAQFIRDGFVFAMMN-------- 286
             +     +   +P           ALLLPL G+    A  I+ GF  A           
Sbjct: 245 SQLGGTPPVAATQPGENAPVGGNAIALLLPLNGQAQTFANAIQQGFSAAKSGQVSLAMPA 304

Query: 287 -----------------------DADRQTNATLTIIDTNAETLESVDAILTSKQIDFVV- 322
                                  D    ++A  T   T      +V A+ T+      V 
Sbjct: 305 QTAQSASSAATTASPAAPATPTPDISSASSAAPTASPTPLAAATAVPALTTTAASTIPVK 364

Query: 323 -------------------------GPLIKGNIEKLQQFQQSRGQMIPTLALNIPDQIDT 357
                                    GPL+K  +E+L +   S    +  LALN P+Q+  
Sbjct: 365 VYDTSNQTLANVIAQAQKDGATTIVGPLLKNEVEQLPRLNPS----LNVLALNQPEQVQP 420

Query: 358 TAGACYLALSPEQEVAQAAKHLFTQGYRYPLILAPQNAYGERVVEAFNEEWRRYSKNKVA 417
               CY ALSPE E A AA+ +  QG ++PLILAP+   G+RVV AF + W++ S   V 
Sbjct: 421 NPNICYFALSPEDEAADAAEFIHKQGKQHPLILAPRGNLGDRVVAAFAKSWQQQSGGVVL 480

Query: 418 VNLFGDKRQLQRNINSIFGLQDSQQNI-------AQMESLLGMGLESQP------RSRRD 464
               G    L++ INS  GL  + Q +       +   ++ G+ + +Q        S  +
Sbjct: 481 QQRTGGVYDLKQAINSGAGLALNGQPVITATSAPSSSTTVGGLTIPNQAPPIANVTSDGN 540

Query: 465 IDAVYIVANSSELTLIKPFIEVAINPDTRPPKLFSNSNSNTGGRQYE---DLSGVTYSDI 521
           +DAVYI+A   ELTLIKP I++  N     P L+++S S   G   +   ++ G+ +SDI
Sbjct: 541 VDAVYIIATPDELTLIKPMIDMR-NKGALHPALYASSRSYQAGLGPDFRFEMEGLQFSDI 599

Query: 522 PLLIQPAPSIKEQL-TQIWPESSNAERRLQALGMDAYRLMVELPQMKIVEGYTIDGQTGV 580
           PLL   +P++ +Q+ TQ   + S    RL A+GMDA++L     Q+    G ++ G TGV
Sbjct: 600 PLLTGASPALMQQVSTQFRNDYSLV--RLFAMGMDAWKLASNFAQLH-QPGNSLSGATGV 656

Query: 581 LSIDEQCVVQREISWAE 597
           LS    CVV R+++W +
Sbjct: 657 LSTSPDCVVNRKLTWLQ 673