Pairwise Alignments

Query, 601 a.a., penicillin-binding protein activator from Vibrio cholerae E7946 ATCC 55056

Subject, 666 a.a., Lipoprotein activator of PBP from the outer membrane A from Alteromonas macleodii MIT1002

 Score =  177 bits (448), Expect = 2e-48
 Identities = 162/654 (24%), Positives = 295/654 (45%), Gaps = 90/654 (13%)

Query: 13  LTPIALSIVLSACSTQP---SSPDVVDIT------AQPLLTAQTYLMRA----DASQGNQ 59
           L+ +A  +VL+ C + P   S P VV+ T       +  +T +  L+ A    + ++  +
Sbjct: 13  LSAVASVLVLTGCGSTPKTQSKPVVVEPTPIETTQVEDNVTPEHKLLEAKKVWERTRNKE 72

Query: 60  QNDWLIM-ALKAAIEENNPDQAQLLIMRLAKQPLTPTQQAQWQLLRAQLLANTEQYQEAL 118
           Q D L++ A    ++   P  AQ ++  + +  ++   Q+ + LL  +  A       A 
Sbjct: 73  QRDTLLLQAADLYLQNQQPVLAQQVLYEVKEDGISGVNQSYYSLLVTKAYAGMPD-ASAE 131

Query: 119 EQLSFQANWSLPQVQWQQYHQLRADIFTALDRSFDSTRELVALYGLSSNKDKEALADQIW 178
           E L+     +       Q  +L+  +FT       +   +     L +N   +    Q+W
Sbjct: 132 ELLAMLDGITGTGETAFQKAELQTQLFTQQGNLAAAANSV-----LKTNLTDDEKVQQVW 186

Query: 179 ANLNHYSASKIIKL-STEPDEAQLDGWLQLAIYMKTLGSDLPQLKNTLEKWLAENPQHPA 237
             +    AS +  + S  PD   L  ++ L    +   S   +L  +L+++      H  
Sbjct: 187 QWITSIPASSLDSVGSAYPD---LSPFITLRELTEENASSPEKLAKSLQQFKQVYRGHVL 243

Query: 238 AIYTPKAITDILALEIVKPTNTALLLPLTGKFAKQAQFIRDGFVFAMMNDADRQTNA--- 294
               P+ + +   L      + A+LLPL+G+ A+  Q +++G + A   D +++ +    
Sbjct: 244 ENALPENVIEATQLTDAGANDIAVLLPLSGRLARTGQVVKNGIMAAYYTDVEKRQDEHLL 303

Query: 295 -TLTIIDTN-AETLESVDAILTSKQIDFVVGPLIKGNIEKLQQFQQSRGQMIPTLALNIP 352
             L  IDTN  +T   +  I  +K   F++GPL+K  +E+L     S    +  LALN P
Sbjct: 304 PRLRFIDTNEVDTQHLLSEIGDTK---FIIGPLLKDTVERLIP---SLPLGVNVLALNRP 357

Query: 353 DQIDTTAGAC-----------------------------------------YLALSPEQE 371
           D++   A A                                          Y  L+PE E
Sbjct: 358 DELPDNASAKGLATGSSNPAIADDALASGTGLAGDDTQNELHSLGLPTSLNYYGLAPEDE 417

Query: 372 VAQAAKHLFTQGYRYPLILAPQNAYGERVVEAFNEEWR--RYSKNKVAVNL----FGDKR 425
             Q A+ +F +GYR P+++A Q++  +R+ + F + WR     +NK   N+    F D  
Sbjct: 418 AKQLAEFIFNKGYRAPIVIAAQSSLYQRMDDTFKKHWRILNNQENKQRANITSVSFNDSN 477

Query: 426 QLQRNINSIFGLQDSQQNIAQMESLLGMGLESQPRSRRDIDAVYIVANSSELTLIKPFIE 485
            L+  I     +  S Q I Q+E +    + + PRSRRDIDA+   A+  +  L+ P IE
Sbjct: 478 SLREGITQALDVAQSNQRINQIEYMTNDEVYNMPRSRRDIDAIVAFASPQDTELLNPIIE 537

Query: 486 VAINP-DTRPPKLFSNSNS---NTGGRQYEDLSGVTYSDIPLLIQPAPS---IKEQLTQI 538
            ++NP D +   +++ S S   ++G  Q+ DL  V + D+P L+ P+ S   +++++ Q 
Sbjct: 538 ASLNPYDGKQVPVYATSRSMDYDSGKNQWRDLQNVHFIDMPWLM-PSHSWQPLQQEVEQA 596

Query: 539 WPESSNAERRLQALGMDAYRLMVELPQMKIVEGYTIDGQTGVLSIDEQCVVQRE 592
           W   +  ++RL A G DAY+L+ +L  +  ++  + +G TG LS+++Q  V R+
Sbjct: 597 WQNQNTMQKRLFAFGFDAYQLLPQLGMLNTLKYLSHEGLTGTLSLNQQGEVIRK 650