Pairwise Alignments

Query, 189 a.a., hemolysin from Vibrio cholerae E7946 ATCC 55056

Subject, 201 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score = 75.5 bits (184), Expect = 6e-19
 Identities = 52/185 (28%), Positives = 89/185 (48%), Gaps = 5/185 (2%)

Query: 3   SIRLLIVSGLLAT----LTGCAGLFIAGAATTANIVTDPRSTQEIWQDNNVELEVAGLAN 58
           S RL  V  L  T    L GC  L +  A  TA + T  R       D  +   +  L  
Sbjct: 4   SSRLWTVFALACTAGVSLAGCGPLVLGAAGGTAVVATQERGFGGFVSDTEIRARINSLWL 63

Query: 59  KEPYRKDARISAVAYRGTVVLLGQSRNEAILEQFIAQARQLKGVKELHNQVQIKAPLSVG 118
           +       RI     +G V+L G++ +  +    +  A Q +GVKE+ N++QI    S+ 
Sbjct: 64  QHSIDLTNRIGLTVDQGRVLLTGRAADAQMRLDAVRLAWQAQGVKEVINEIQIDNGSSIV 123

Query: 119 EISNDSWITTKVKSALLTKSELNGIKIKVVTEDRVVYLFGYV-SPEHAEMAIGVARNIIG 177
           + + D+WI+T+++S +   ++++     + T D VVYL G   S +  + A+  AR++  
Sbjct: 124 DTARDTWISTQIRSRITFDADIHSQNYSIDTVDGVVYLMGVASSQDELDRALQQARSVPN 183

Query: 178 VKQVV 182
           V++VV
Sbjct: 184 VQRVV 188



 Score = 22.7 bits (47), Expect = 0.004
 Identities = 10/37 (27%), Positives = 23/37 (62%)

Query: 75  GTVVLLGQSRNEAILEQFIAQARQLKGVKELHNQVQI 111
           G V L+G + ++  L++ + QAR +  V+ + + V++
Sbjct: 157 GVVYLMGVASSQDELDRALQQARSVPNVQRVVSYVRL 193