Pairwise Alignments

Query, 245 a.a., cytochrome c1 from Vibrio cholerae E7946 ATCC 55056

Subject, 251 a.a., ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  209 bits (532), Expect = 4e-59
 Identities = 116/252 (46%), Positives = 153/252 (60%), Gaps = 10/252 (3%)

Query: 1   MKKWIV--VLFAMLPSLAMAAGANVHLDKANNDLTDQASLQNGAKLFMNYCFGCHSTQYQ 58
           MKK ++  +L   L   A+AAG N  LDKA     D A+LQNGAKLF+NYC  CHS  + 
Sbjct: 1   MKKILLGFMLALGLSGAALAAGGNFPLDKAPQRTNDMAALQNGAKLFVNYCLSCHSAAFM 60

Query: 59  RYERVANDLGIPADLMKENLIFDPETKIGQLMENAIPDKSAAKWFGAPPPDLTLVARVR- 117
           RY R+  D+G+    + ENL F P  KIG  M+ AI  K A ++FGA PPDL+L+AR R 
Sbjct: 61  RYNRL-RDIGLNDKQIAENLTF-PTDKIGDTMKAAIDPKQAKQFFGANPPDLSLIARSRS 118

Query: 118 -----GTDWLYTYLRSFYTDPSRPFGVNNIVFPSVGMPHVLEELQGTPEPIFETKVVDGN 172
                G D++YT LRS+Y D ++P G NN+VFP++GMPH L ELQG   P+ E  +  G+
Sbjct: 119 SHAGTGADYVYTLLRSYYRDDTKPTGWNNLVFPNIGMPHPLWELQGERRPVHEKVMSHGH 178

Query: 173 EVQHVVGVKSRGNGELSEGEYNQAVRDLVNFLEYSGEPMKLERQNLGWWTMGFLVIFTIV 232
           EV  V G +    G LS+  Y + V DLV +L++  EP +  R  +G W + FL  FTIV
Sbjct: 179 EVDRVKGWEQVKPGTLSDARYEENVGDLVAYLQWMAEPSQNTRVRIGVWVLLFLAAFTIV 238

Query: 233 VVALKKEYWRDV 244
              L   YW+DV
Sbjct: 239 AWRLNAAYWKDV 250