Pairwise Alignments

Query, 421 a.a., cytochrome b from Vibrio cholerae E7946 ATCC 55056

Subject, 478 a.a., Ubiquinol-cytochrome C reductase, cytochrome B subunit (EC 1.10.2.2) from Variovorax sp. SCN45

 Score =  476 bits (1225), Expect = e-139
 Identities = 247/478 (51%), Positives = 302/478 (63%), Gaps = 76/478 (15%)

Query: 2   QALLDWVEKRLPAMNAYKKHLSEYPMPKNFNFWYLFGSLAMLVLVNQLLTGIWLTMNYVP 61
           + LL+WV+ R P    +     +Y  PKNFNFWY+FGSLAMLVLV Q++TGI+L M+Y P
Sbjct: 15  EKLLNWVDNRFPLSKLWNDQWGKYYAPKNFNFWYIFGSLAMLVLVIQIVTGIFLVMHYKP 74

Query: 62  SGEGAFASIEYIMRDVEYGWLLRYMHSTGASAFFVVVYLHMFRGLIYGSYQKPRELLWIF 121
               AFAS+EYIMRDV +GWL+RY+HSTGASAFF+VVYLHMFRGL+YGSY+KPREL+W+F
Sbjct: 75  DAAQAFASVEYIMRDVPWGWLIRYIHSTGASAFFIVVYLHMFRGLMYGSYRKPRELIWVF 134

Query: 122 GMLIFLVLMAEAFMGYLLPWGQMSYWGAQVIISLFGAIPVIGDDLTLWIRGDYVISGATL 181
           G  IFL LMAEAFMGYLLPWGQMSYWGAQVI++LF AIP IG DL L IRGDYV+S ATL
Sbjct: 135 GCAIFLCLMAEAFMGYLLPWGQMSYWGAQVIVNLFAAIPFIGPDLALLIRGDYVVSDATL 194

Query: 182 NRFFALHVIALPIVLLLLIVLHILALHEVGSNNPDGIETKLPKGSMGEGYESQFKFHEYY 241
           NRFF+ HVIA+P+VLL L+V H++ALHEVGSNNPDGIE K  +G  G             
Sbjct: 195 NRFFSFHVIAVPLVLLGLVVAHLIALHEVGSNNPDGIEIKAKRGPDGHP----------- 243

Query: 242 TKKYDIIDSIPFHPYGTVKDLIGVAGFLFLFCYVLFFNPEMGGYFLEPPNFEAANPLKTP 301
                 +D IP HPY TV D+ GV  FL +F  V+FF PE GGYFLE  NF  A+ LKTP
Sbjct: 244 ------LDGIPSHPYYTVHDIFGVVVFLTIFSAVIFFAPEAGGYFLEYNNFIPADSLKTP 297

Query: 302 EHIAPVWYFTPFYAILRAVPD--------------------------------------- 322
            HIAPVWYFTPFY++LRA  D                                       
Sbjct: 298 NHIAPVWYFTPFYSMLRATTDDMVNVFSLIIAAGAILNFVKGKSGTAFKVALIVVAAVVI 357

Query: 323 --------KLLGVIAMGASIVVLFLLPWLDRCKVRSYRYRSKFHLFNIAQFTVSFIALGI 374
                   K  GV+ MG S+++LF LPWLD  +V+S RYR  +H +    F   F+ LG 
Sbjct: 358 FLLKSFDAKFWGVVVMGGSVIILFFLPWLDHSEVKSIRYRPSWHKYVYGAFVFFFLILGY 417

Query: 375 LGALP------------ATPTYTLLAQIFSLCYFMFFVLLFFYSKNEATKPLPTRVTY 420
           LG  P            A      ++QI +L YF FF+L+ ++S+    K +P RV +
Sbjct: 418 LGIQPPGVWGNLVIGSFALDIAQTISQIGTLVYFGFFLLMPWWSRKGEFKTVPERVVF 475