Pairwise Alignments

Query, 421 a.a., cytochrome b from Vibrio cholerae E7946 ATCC 55056

Subject, 478 a.a., cytochrome bc complex cytochrome b subunit from Variovorax sp. OAS795

 Score =  472 bits (1214), Expect = e-137
 Identities = 246/478 (51%), Positives = 301/478 (62%), Gaps = 76/478 (15%)

Query: 2   QALLDWVEKRLPAMNAYKKHLSEYPMPKNFNFWYLFGSLAMLVLVNQLLTGIWLTMNYVP 61
           + LL+WV+ R P    +     +Y  PKNFNFWY+FGSLAMLVLV Q++TGI+L M+Y P
Sbjct: 15  EKLLNWVDNRFPLTKLWNDQWGKYYAPKNFNFWYIFGSLAMLVLVIQIVTGIFLVMHYKP 74

Query: 62  SGEGAFASIEYIMRDVEYGWLLRYMHSTGASAFFVVVYLHMFRGLIYGSYQKPRELLWIF 121
               AFAS+EYIMRDV +GWL+RY+HSTGASAFF+VVYLHMFRGL+YGSY+KPREL+W+F
Sbjct: 75  DANQAFASVEYIMRDVPWGWLIRYIHSTGASAFFIVVYLHMFRGLMYGSYRKPRELIWVF 134

Query: 122 GMLIFLVLMAEAFMGYLLPWGQMSYWGAQVIISLFGAIPVIGDDLTLWIRGDYVISGATL 181
           G  IFL LMAEAFMGYLLPWGQMSYWGAQVI++LF AIP +G DL L IRGDYV+S ATL
Sbjct: 135 GCAIFLCLMAEAFMGYLLPWGQMSYWGAQVIVNLFAAIPFVGPDLALLIRGDYVVSDATL 194

Query: 182 NRFFALHVIALPIVLLLLIVLHILALHEVGSNNPDGIETKLPKGSMGEGYESQFKFHEYY 241
           NRFF+ HVIA+P+VLL L+V H++ALHEVGSNNPDGIE K  +G  G             
Sbjct: 195 NRFFSFHVIAVPLVLLGLVVAHLIALHEVGSNNPDGIEIKANRGPDGHP----------- 243

Query: 242 TKKYDIIDSIPFHPYGTVKDLIGVAGFLFLFCYVLFFNPEMGGYFLEPPNFEAANPLKTP 301
                 +D IP HPY TV D+ GV  FL +F  V+FF PE GGYFLE  NF  A+ LKTP
Sbjct: 244 ------LDGIPSHPYYTVHDIFGVVVFLTIFSAVIFFAPEAGGYFLEYNNFIPADSLKTP 297

Query: 302 EHIAPVWYFTPFYAILRAVPD--------------------------------------- 322
            HIAPVWYFTPFY++LRA  D                                       
Sbjct: 298 NHIAPVWYFTPFYSMLRATTDDMVNVFALIIGLAAVLNFVKGRSSTALKIALVVVAAVAI 357

Query: 323 --------KLLGVIAMGASIVVLFLLPWLDRCKVRSYRYRSKFHLFNIAQFTVSFIALGI 374
                   K  GV+ MG S+++LF LPWLD  +V+S RYR  +H +    F   F+ LG 
Sbjct: 358 FLLKAFDAKFWGVVVMGGSVIILFFLPWLDHSEVKSIRYRPSWHKYVYGVFVFFFLILGY 417

Query: 375 LGALPATPTYTL------------LAQIFSLCYFMFFVLLFFYSKNEATKPLPTRVTY 420
           LG         L            ++QI +L YF FF+L+ ++S     K +P RVT+
Sbjct: 418 LGIQAPGVWGNLVIGSFVLDIAQTISQIGTLFYFGFFLLMPWWSSKGEFKTVPDRVTF 475