Pairwise Alignments

Query, 421 a.a., cytochrome b from Vibrio cholerae E7946 ATCC 55056

Subject, 422 a.a., Cytochrome b from Azospirillum sp. SherDot2

 Score =  387 bits (994), Expect = e-112
 Identities = 197/417 (47%), Positives = 265/417 (63%), Gaps = 30/417 (7%)

Query: 4   LLDWVEKRLPAMNAYKKHLSEYPMPKNFNFWYLFGSLAMLVLVNQLLTGIWLTMNYVPSG 63
           +++W++ RLP         + YPMP+N N+ + FG++A ++L+  + TG++L M Y    
Sbjct: 13  VVNWIDSRLPIFTMLDHEYNHYPMPRNVNYLWAFGAIAGIMLMIMIATGLFLAMQYSSHT 72

Query: 64  EGAFASIEYIMRDVEYGWLLRYMHSTGASAFFVVVYLHMFRGLIYGSYQKPRELLWIFGM 123
             AF S+E IMRDV YGWL+RY+H+ GAS FF+ VY+HMFR L YGSY+ PRE+LWI G+
Sbjct: 73  SLAFDSVERIMRDVNYGWLIRYVHANGASMFFIAVYIHMFRALYYGSYKAPREILWILGV 132

Query: 124 LIFLVLMAEAFMGYLLPWGQMSYWGAQVIISLFGAIPVIGDDLTLWIRGDYVISGATLNR 183
           +IFLV+M  AFMGY+LPWGQMS+WGA VI +LF A P++GD +   + G + +   TLNR
Sbjct: 133 IIFLVMMGTAFMGYVLPWGQMSFWGATVITNLFSAFPIVGDPIVTLLWGGFSVDNPTLNR 192

Query: 184 FFALHVIALPIVLLLLIVLHILALHEVGSNNPDGIETKLPKGSMGEGYESQFKFHEYYTK 243
           FFALH + LP VLL L++LH  ALH  GSNNP GI+ K P+                   
Sbjct: 193 FFALHFL-LPFVLLGLVILHTAALHVCGSNNPLGIDPKGPQ------------------- 232

Query: 244 KYDIIDSIPFHPYGTVKDLIGVAGFLFLFCYVLFFNPEMGGYFLEPPNFEAANPLKTPEH 303
                D++PF+PY T+KD   V  FL +F   +FF P   G+   P N+  ANPL TP H
Sbjct: 233 -----DTVPFNPYVTLKDGFAVVVFLIVFAVFVFFMPNYMGH---PDNYIPANPLVTPAH 284

Query: 304 IAPVWYFTPFYAILRAVPDKLLGVIAMGASIVVLFLLPWLDRCKVRSYRYRSKFHLFNIA 363
           I P WYF PFYA+LRA+PDKL GV+AM  SI +L  LPWLDR KVRS ++R  +  F   
Sbjct: 285 IVPEWYFLPFYAMLRAIPDKLGGVLAMFGSIALLAFLPWLDRSKVRSCKFRPVYRQF-FW 343

Query: 364 QFTVSFIALGILGALPATPTYTLLAQIFSLCYFM-FFVLLFFYSKNEATKPLPTRVT 419
              +  + LG  GA+PA  ++ L+A+I +  YF  F VLL    K E T+PLP  ++
Sbjct: 344 ILAIDALILGYAGAMPAEGSWLLIARIGTFYYFFHFLVLLPVLGKLERTRPLPNSIS 400