Pairwise Alignments

Query, 421 a.a., cytochrome b from Vibrio cholerae E7946 ATCC 55056

Subject, 421 a.a., Cytochrome b/c1 from Alteromonas macleodii MIT1002

 Score =  605 bits (1559), Expect = e-177
 Identities = 279/420 (66%), Positives = 338/420 (80%), Gaps = 1/420 (0%)

Query: 1   MQALLDWVEKRLPAMNAYKKHLSEYPMPKNFNFWYLFGSLAMLVLVNQLLTGIWLTMNYV 60
           M A L W+E+R+P M     H  +YP PKN NFWY+FG LA +VLVNQ++TGIWLTMN+V
Sbjct: 1   MNAFLGWIEERIPMMRVANMHALQYPAPKNMNFWYVFGFLATIVLVNQIVTGIWLTMNFV 60

Query: 61  PSGEGAFASIEYIMRDVEYGWLLRYMHSTGASAFFVVVYLHMFRGLIYGSYQKPRELLWI 120
           PS EGAFAS+EYIMR+++YGW++RYMHSTGASAFF+VVYLHMFRG+IYGSYQKPRELLW+
Sbjct: 61  PSSEGAFASVEYIMREIDYGWIIRYMHSTGASAFFIVVYLHMFRGMIYGSYQKPRELLWV 120

Query: 121 FGMLIFLVLMAEAFMGYLLPWGQMSYWGAQVIISLFGAIPVIGDDLTLWIRGDYVISGAT 180
           FGM I+L LMAEAFMGY+LPWGQMSYWGAQVI+SLFGAIPV+G DL +W++GDYVISGAT
Sbjct: 121 FGMFIYLALMAEAFMGYVLPWGQMSYWGAQVIVSLFGAIPVVGPDLVIWLQGDYVISGAT 180

Query: 181 LNRFFALHVIALPIVLLLLIVLHILALHEVGSNNPDGIETKLPKGSMGEGYESQFKFHEY 240
           LNRFFALHVIALP+V+++L+ LHI+ALHEVGSNNPDGI  K  KGS+ E  +++++ HEY
Sbjct: 181 LNRFFALHVIALPLVIVILVFLHIIALHEVGSNNPDGIAIKHKKGSLPESEKTKYEIHEY 240

Query: 241 YTKKYDIIDSI-PFHPYGTVKDLIGVAGFLFLFCYVLFFNPEMGGYFLEPPNFEAANPLK 299
           YT KYDI D + PF P+  +KDL+    FL LF YVLFF PEMGG FLE PNFE ANPLK
Sbjct: 241 YTSKYDIADDVLPFFPHIVLKDLVAFCVFLALFTYVLFFAPEMGGKFLEHPNFEIANPLK 300

Query: 300 TPEHIAPVWYFTPFYAILRAVPDKLLGVIAMGASIVVLFLLPWLDRCKVRSYRYRSKFHL 359
           TP HI PVWYFTPFYAIL+AVPDKL GV+AM  +I  LF LPW+DR +V+S+RYR   H 
Sbjct: 301 TPAHIFPVWYFTPFYAILKAVPDKLFGVLAMFGAIAALFALPWVDRGRVKSWRYRCGLHK 360

Query: 360 FNIAQFTVSFIALGILGALPATPTYTLLAQIFSLCYFMFFVLLFFYSKNEATKPLPTRVT 419
            N+  F + F+ LG LG  P      + +QI ++ YF FF+ LF YSKNE TKP+P R++
Sbjct: 361 VNLIVFAIVFVFLGYLGGTPQENWKIIASQIATVMYFGFFIALFLYSKNENTKPVPERIS 420