Pairwise Alignments

Query, 421 a.a., cytochrome b from Vibrio cholerae E7946 ATCC 55056

Subject, 427 a.a., ubiquinol-cytochrome c reductase cytochrome b subunit from Agrobacterium fabrum C58

 Score =  358 bits (920), Expect = e-103
 Identities = 185/421 (43%), Positives = 257/421 (61%), Gaps = 37/421 (8%)

Query: 7   WVEKRLPAMNAYKKHLSEYPMPKNFNFWYLFGSLAMLVLVNQLLTGIWLTMNYVPSGEGA 66
           W++ RLP           YP+P+N N+ Y FG++  ++L+ Q+LTG+ L M+Y      A
Sbjct: 16  WIDSRLPLPRMIYDSFVAYPVPRNLNYAYTFGAMLAVMLIVQILTGVVLAMHYAAETTVA 75

Query: 67  FASIEYIMRDVEYGWLLRYMHSTGASAFFVVVYLHMFRGLIYGSYQKPRELLWIFGMLIF 126
           F S+E IMRDV +GWLLRYMH+ GAS FF+ VYLH+ RGL YGSY+ PRE+LWI G +I+
Sbjct: 76  FNSVEKIMRDVNHGWLLRYMHANGASFFFIAVYLHIARGLYYGSYKAPREILWILGCVIY 135

Query: 127 LVLMAEAFMGYLLPWGQMSYWGAQVIISLFGAIPVIGDDLTLWIRGDYVISGATLNRFFA 186
           L++MA  FMGY+LPWGQMS+WGA VI   F A P++G+ +  ++ G + +   TLNRFFA
Sbjct: 136 LLMMATGFMGYVLPWGQMSFWGATVITGFFTAFPLVGEWIQQFLLGGFAVDNPTLNRFFA 195

Query: 187 LHVIALPIVLLLLIVLHILALHEVGSNNPDGIETKLPKGSMGEGYESQFKFHEYYTKKYD 246
           LH + LP ++  +++LHI ALH  G  NP G+E K                         
Sbjct: 196 LHYL-LPFMIAGVVILHIWALHVTGQTNPTGVEVK------------------------S 230

Query: 247 IIDSIPFHPYGTVKDLIGVAGFLFLFCYVLFFNPEMGGYFLEPPNFEAANPLKTPEHIAP 306
             D++PF PY T+KD +GV+ FL  + + +F+ P   G+   P N+  A+PLKTP HI P
Sbjct: 231 KTDTVPFTPYATLKDALGVSVFLIAYAWFIFYMPNFLGH---PDNYIMADPLKTPAHIVP 287

Query: 307 VWYFTPFYAILRA-------VPDKLLGVIAMGASIVVLFLLPWLDRCKVRSYRYRSKFHL 359
            WY+ PFYA+LRA       +  KL GV+ M  +I+VLF LPWLD  KVRS  YR  + +
Sbjct: 288 EWYYLPFYAMLRAITFNVGPIDSKLGGVLVMFGAIIVLFFLPWLDTSKVRSAVYRPWYKM 347

Query: 360 FNIAQFTVSFIALGILGALPATPTYTLLAQIFSLCYFMFF-VLLFFYSKNEATKPLPTRV 418
           F    F V+ I LG LG+ PA   Y +++QI +L YF FF V++      E  + +P  +
Sbjct: 348 F-FWLFVVNAILLGWLGSRPAEGLYVVMSQIGTLYYFGFFLVIMPILGLVETPRRIPNSI 406

Query: 419 T 419
           T
Sbjct: 407 T 407