Pairwise Alignments

Query, 456 a.a., serine endoprotease DegQ from Vibrio cholerae E7946 ATCC 55056

Subject, 485 a.a., Periplasmic pH-dependent serine endoprotease DegQ from Xanthobacter sp. DMC5

 Score =  258 bits (658), Expect = 4e-73
 Identities = 175/473 (36%), Positives = 261/473 (55%), Gaps = 30/473 (6%)

Query: 11  ALSLSLSAILSPLPATAALPLSVNGEQIPSLAPMLEKVTPAVVSI-AVEGTQVSRQRLPD 69
           AL L   A   P  A   +P S   E   + AP++ K  PAVV++ A++  Q     + D
Sbjct: 15  ALLLGTPAFAQPA-AQQRVPAS-QAEVTLTFAPVVAKTAPAVVNVYALKTAQQRVNPIFD 72

Query: 70  Q--FRFFFGP----------DFPTEQLQERPFRGLGSGVIINADKGYVVTNYHVINGAEK 117
              FR FFG           D P  +  ER  R LGSGVI++   G V+TNYHVI GA++
Sbjct: 73  DPFFRRFFGMPGPGGPGGPGDGPGLRAPERVQRSLGSGVIVDPS-GLVLTNYHVIEGADE 131

Query: 118 IRVKLYDGREFDAELVGGDEMSDVALLKLNKA--KNLTEIRIADSDKLRVGDFAVAIGNP 175
           IR+ L D RE++AE++  D+ +D+A+L++     +    + + DSD L VGD  +AIG+P
Sbjct: 132 IRIALNDRREYEAEVLLRDQRTDLAVLRIKTEAKERFPFLELGDSDSLAVGDLVLAIGDP 191

Query: 176 FGLGQTVTSGIVSALGRSGLNIENFENFIQTDAAINSGNSGGALVNLNGELIGINTAILG 235
           FG+GQTVT GIVSAL R+ + + +++ FIQTDAAIN GNSGG LV++ G ++GIN+AI  
Sbjct: 192 FGVGQTVTQGIVSALARTQVGVSDYQFFIQTDAAINPGNSGGPLVDMAGRVVGINSAIYS 251

Query: 236 PNGGNVGIGFAIPSNMMKNLTDQILEFGE-VKRGMLGVQGGEITSELADALGYESSKGAF 294
            +GG+ GIGFAIP+NM + + +Q     + V+R  LG +   +T ++A++LG     G  
Sbjct: 252 RSGGSHGIGFAIPANMGRVVVEQAKSGSKSVRRPWLGAKLQRVTPDIAESLGLPRPTGVL 311

Query: 295 VSQVVPDSAADKAGIKAGDIITSLNGKKIDTFSELRAKVATLGAGKTITLGVLRDGKNQN 354
           V  V   S A KAG++ GD++ S+ G+ ID    L  ++AT   G    L V R GK+Q 
Sbjct: 312 VQSVTAGSPAAKAGLRTGDLVVSVEGQGIDDPESLNYRLATRPIGGRAALLVNRSGKDQT 371

Query: 355 IDVTLGEQQNAKTKAESLHQGLS---GAELSNTTDS--------DPIQGVKVTEVQKGSA 403
           + V L        + E L +G S   GA + N + +            GV V +VQ  S 
Sbjct: 372 LVVVLEVAPETVPREELLLRGRSPFAGATIVNLSPAVAEELKVDTNATGVVVYDVQDNSP 431

Query: 404 AESYQLQKDDIIIGVNRKRVKNIAELRAIMEKSPNILALNIQRGERTLYLVVR 456
           A +   +  D+I+ VN ++V    +L  +         + + RG R++  V+R
Sbjct: 432 AAAAGFRPGDVIVEVNNEKVARTGDLNQLAAVPQRGWRVTVLRGGRSITAVLR 484