Pairwise Alignments

Query, 456 a.a., serine endoprotease DegQ from Vibrio cholerae E7946 ATCC 55056

Subject, 386 a.a., Outer membrane stress sensor protease DegS from Variovorax sp. SCN45

 Score =  276 bits (706), Expect = 8e-79
 Identities = 165/357 (46%), Positives = 226/357 (63%), Gaps = 20/357 (5%)

Query: 9   LTALSLSLSAILSPLPATAALP-LSVNGEQIPSLAPMLEKVTPAVVSIAVEGTQVSRQRL 67
           L   + SL  ++S + A  A P ++  G    SLA   +K +PAVVSI    T  + QR 
Sbjct: 30  LNKRATSLGGVVSVVQAPTANPAIATPG----SLAVPAKKASPAVVSI---NTSKAAQRH 82

Query: 68  PDQ----FRFFFGPDFPTEQLQERPFRGLGSGVIINADKGYVVTNYHVINGAEKIRVKLY 123
           P      FRFFFG         ++P  GLGSGVI++ D GY++TN HV+ GA++I V L 
Sbjct: 83  PRSNDPWFRFFFGDQ------DDQPQVGLGSGVIVSTD-GYILTNNHVVEGADEIEVTLN 135

Query: 124 DGREFDAELVGGDEMSDVALLKLNKAKNLTEIRIADSDKLRVGDFAVAIGNPFGLGQTVT 183
           D R    +++G D  +D+A+LK+   K L  I + DSD L+VGD  +AIGNPFG+GQTVT
Sbjct: 136 DSRHARGKVIGTDPDTDLAVLKIELDK-LPVIVLGDSDALQVGDQVLAIGNPFGVGQTVT 194

Query: 184 SGIVSALGRSGLNIENFENFIQTDAAINSGNSGGALVNLNGELIGINTAILGPNGGNVGI 243
           SGIVSALGR+ L I NFENFIQTDAAIN GNSGGAL++++G L GINTAI   +GG++GI
Sbjct: 195 SGIVSALGRNQLGINNFENFIQTDAAINPGNSGGALIDVHGNLQGINTAIYSRSGGSMGI 254

Query: 244 GFAIPSNMMKNLTDQILEFGEVKRGMLGVQGGEITSELADALGYESSKGAFVSQVVPDSA 303
           GFAIP +M K + + I++ G+V+RG +GV+  +++ ELA+  G ++  G  ++ V+ +  
Sbjct: 255 GFAIPVSMAKIVLEGIVKEGQVRRGWIGVEPSDLSPELAETFGVKADSGVIITGVLQNGP 314

Query: 304 ADKAGIKAGDIITSLNGKKIDTFSELRAKVATLGAGKTITLGVLRDGKNQNIDVTLG 360
           A KAGI+ GD+ITS+  KK D    L   VA L  G T    + R      +DVT G
Sbjct: 315 AAKAGIRPGDVITSVGEKKTDNVQALLTAVAGLKPGSTSRFALQRGSDKMELDVTPG 371