Pairwise Alignments

Query, 456 a.a., serine endoprotease DegQ from Vibrio cholerae E7946 ATCC 55056

Subject, 492 a.a., putative periplasmic serine endoprotease DegP-like from Pseudomonas putida KT2440

 Score =  256 bits (654), Expect = 1e-72
 Identities = 160/429 (37%), Positives = 251/429 (58%), Gaps = 31/429 (7%)

Query: 36  EQIPSLAPMLEKVTPAVVSIAVEGTQVSR----------QRLPDQFRFFFGPDFPTEQL- 84
           E +P    ++E+ +PAVV+I+ +     R          + LP  FR FF  + P +   
Sbjct: 44  EALPDFTTLVEQASPAVVNISTKQKLPDRRIAANQMPDLEGLPPMFREFFERNMPQQPRS 103

Query: 85  ----QERPFRGLGSGVIINADKGYVVTNYHVINGAEKIRVKLYDGREFDAELVGGDEMSD 140
               ++R  + LGSG II++D GYV+TN HV+  A++I V+L D  E  A+LVG D  +D
Sbjct: 104 PRGDRQREAQSLGSGFIISSD-GYVLTNNHVVADADEIIVRLSDRSELQAKLVGTDPRTD 162

Query: 141 VALLKLNKAKNLTEIRIADSDKLRVGDFAVAIGNPFGLGQTVTSGIVSALGRSGLNIENF 200
           VALLK++  KNL  +++ DS+KL+VG++ +AIG+PFG   +VT GIVSA GR+  N + +
Sbjct: 163 VALLKVD-GKNLPTVKLGDSEKLKVGEWVLAIGSPFGFDHSVTKGIVSAKGRTLPN-DTY 220

Query: 201 ENFIQTDAAINSGNSGGALVNLNGELIGINTAILGPNGGNVGIGFAIPSNMMKNLTDQIL 260
             FIQTD AIN GNSGG L N+ GE++GIN+ I   +GG +G+ FAIP ++  ++++Q+ 
Sbjct: 221 VPFIQTDVAINPGNSGGPLFNMKGEVVGINSQIFTRSGGFMGLSFAIPIDVAIDVSNQLK 280

Query: 261 EFGEVKRGMLGVQGGEITSELADALGYESSKGAFVSQVVPDSAADKAGIKAGDIITSLNG 320
           + G+V RG LGV   E+  +LA++ G +   GA V+QV+ +  A K G++ GD+I S+NG
Sbjct: 281 KDGKVSRGWLGVVIQEVNKDLAESFGLDKPAGALVAQVLENGPAAKGGLQVGDVILSMNG 340

Query: 321 KKIDTFSELRAKVATLGAGKTITLGVLRDGKNQNIDVT----------LGEQQNAKTKAE 370
           + I   ++L   V  L  G+   L ++R+GK QN+D++          +G       +  
Sbjct: 341 QPIVMSADLPHLVGGLKDGEKAKLEIIRNGKRQNLDISVGALPDDDVDIGAGTEGSAERS 400

Query: 371 SLHQGLSGAELS--NTTDSDPIQGVKVTEVQKGSAAESYQLQKDDIIIGVNRKRVKNIAE 428
           S   G+S A+L+       +   GV + EVQ G AA    L+  D+I  +N + + +  E
Sbjct: 401 SNRLGVSVADLTAEQKKSLELKGGVVIKEVQDGPAA-MIGLRPGDVISHLNNQAIGSAKE 459

Query: 429 LRAIMEKSP 437
              I ++ P
Sbjct: 460 FTEIAKELP 468



 Score = 43.9 bits (102), Expect = 1e-08
 Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 3/92 (3%)

Query: 270 LGVQGGEITSELADALGYESSKGAFVSQVVPDSAADKAGIKAGDIITSLNGKKIDTFSEL 329
           LGV   ++T+E   +L     KG  V + V D  A   G++ GD+I+ LN + I +  E 
Sbjct: 404 LGVSVADLTAEQKKSL---ELKGGVVIKEVQDGPAAMIGLRPGDVISHLNNQAIGSAKEF 460

Query: 330 RAKVATLGAGKTITLGVLRDGKNQNIDVTLGE 361
                 L   +++++ VLR G+   I   L E
Sbjct: 461 TEIAKELPKNRSVSMRVLRQGRASFITFKLAE 492