Pairwise Alignments

Query, 456 a.a., serine endoprotease DegQ from Vibrio cholerae E7946 ATCC 55056

Subject, 385 a.a., Serine endoprotease DegS from Pseudomonas sp. DMC3

 Score =  254 bits (648), Expect = 4e-72
 Identities = 154/371 (41%), Positives = 221/371 (59%), Gaps = 24/371 (6%)

Query: 5   PLLVLTALSLSLSAILSPLPATAALP-LSVNGEQIP----------SLAPMLEKVTPAVV 53
           PLL    ++L    I+   P    LP L VN +Q P          S A  +    P+VV
Sbjct: 11  PLLAGVLIAL---LIIQRYPEWVGLPSLDVNLQQAPQTTIVQQGPVSYADAVGIAAPSVV 67

Query: 54  SIAVEGTQVSRQRLP----DQFRFFFGPDFPTEQLQERPFRGLGSGVIINADKGYVVTNY 109
           ++      +++   P     QFR FFG + P ++  E     LGSGVI++ + GY++TN 
Sbjct: 68  NLYTTKV-INKPAHPLFEDPQFRRFFGDNSPKQKRMES---SLGSGVIMSPE-GYILTNN 122

Query: 110 HVINGAEKIRVKLYDGREFDAELVGGDEMSDVALLKLNKAKNLTEIRIADSDKLRVGDFA 169
           HV +GA++I V L DGRE  A ++G D  +D+A+LK++  KNL  I +  SD +R+GD A
Sbjct: 123 HVTSGADQIVVALKDGRETLARVIGSDPETDLAVLKID-LKNLPAITVGRSDSIRIGDVA 181

Query: 170 VAIGNPFGLGQTVTSGIVSALGRSGLNIENFENFIQTDAAINSGNSGGALVNLNGELIGI 229
           +AIGNPFG+GQTVT GI+SA GR+ L + N+E+FIQTDAAIN GNSGGALV+ NG L GI
Sbjct: 182 LAIGNPFGVGQTVTMGIISATGRNQLGLNNYEDFIQTDAAINPGNSGGALVDANGNLTGI 241

Query: 230 NTAILGPNGGNVGIGFAIPSNMMKNLTDQILEFGEVKRGMLGVQGGEITSELADALGYES 289
           NTAI   +GG+ GIGFAIP  +   +   I+E G+V RG LG++   +T ELA++ G   
Sbjct: 242 NTAIFSKSGGSQGIGFAIPVKLAMEVMKSIIEHGQVIRGWLGIEVQPLTQELAESFGLSG 301

Query: 290 SKGAFVSQVVPDSAADKAGIKAGDIITSLNGKKIDTFSELRAKVATLGAGKTITLGVLRD 349
             G  V+ +  D  A KAG++ GD+I S++G+          +VA +     +T+ V+R+
Sbjct: 302 RPGIVVAGIFRDGPAQKAGLQLGDVILSIDGEPAGDGRRSMNQVARIKPTDKVTIQVMRN 361

Query: 350 GKNQNIDVTLG 360
           GK   +   +G
Sbjct: 362 GKELKLTAEIG 372