Pairwise Alignments

Query, 456 a.a., serine endoprotease DegQ from Vibrio cholerae E7946 ATCC 55056

Subject, 492 a.a., Outer membrane stress sensor protease DegS from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  249 bits (637), Expect = 1e-70
 Identities = 176/495 (35%), Positives = 267/495 (53%), Gaps = 47/495 (9%)

Query: 2   MKKPLLVLTALSLSLSA----------ILSPLPATAALPLS-------VNGEQIPSLAPM 44
           MK   L  T L LSL+A          ++S   ATAA P++       V    +P  + +
Sbjct: 1   MKTLSLTATRLVLSLAAAGIVGGASVGLVSGSHATAATPVATQQAAPMVTAAAVPDFSQI 60

Query: 45  LEKVTPAVVSIAVEGT------QVSRQRLP----------DQFRFFFGPDFPTEQLQERP 88
            ++   AVV+I+V G       Q ++ RLP          + F+ F GP       QE P
Sbjct: 61  AQRHGAAVVNISVVGKAGPEDGQQAQNRLPPGIDPNDPFFEFFKRFQGPG--QGGAQEAP 118

Query: 89  FRGLGSGVIINADKGYVVTNYHVINGAEKIRVKLYDGREFDAELVGGDEMSDVALLKLNK 148
            RG GSG II+AD G V+TN HV+  A+++ VKL D REF A+++G D  +DVA+L+++ 
Sbjct: 119 SRGQGSGFIISAD-GLVLTNAHVVRNAQRVTVKLTDRREFVAKVLGSDPKTDVAVLRID- 176

Query: 149 AKNLTEIRIADSDKLRVGDFAVAIGNPFGLGQTVTSGIVSALGRSGLNIENFENFIQTDA 208
           AK+L  + + ++  L+VG++ +AIG PFG   +VT+G+VSA GRS L  ++F  FIQTD 
Sbjct: 177 AKDLPVVPLGNTKDLKVGEWVLAIGAPFGFENSVTAGVVSAKGRS-LPDDSFVPFIQTDV 235

Query: 209 AINSGNSGGALVNLNGELIGINTAILGPNGGNVGIGFAIPSNMMKNLTDQILEFGEVKRG 268
           A+N GNSGG L N  GE++GIN+ I    GG  G+ FAIP      + DQI+  G+    
Sbjct: 236 AVNPGNSGGPLFNARGEVVGINSQIYSHTGGYQGLSFAIPMETALKVKDQIVAHGKASHA 295

Query: 269 MLGVQGGEITSELADALGYESSKGAFVSQVVPDSAADKAGIKAGDIITSLNGKKIDTFSE 328
            LGV   E+   LA++   +  +GA VS V P S A KAG++ GD+I  ++G+ I    +
Sbjct: 296 RLGVSVQEVNQTLAESFQLDKPEGALVSSVEPGSPAAKAGLQVGDVIRQMDGQPIVGSGD 355

Query: 329 LRAKVATLGAGKTITLGVLRDGKNQNIDVTLGEQQNAKTKA----ESLHQGLSGAELSNT 384
           L A +     G+ + L V R GK  ++   LG+      K     ++  QG  G  L   
Sbjct: 356 LPALIGQALPGEKVKLDVWRQGKPVSLTAQLGDAAAKAVKTAGDEKAADQGRLGLALRPL 415

Query: 385 TDSD----PIQGVKVTEVQKGSAAESYQLQKDDIIIGVNRKRVKNIAELRAIMEKSPNIL 440
              +     +    V E  +G AA +  +Q  D+++ VN  +V+++ ++RA++ KS   L
Sbjct: 416 APQERREAGVDSGLVVEDAQGPAALA-GVQPGDVLLAVNGAKVQSVEQVRAMLGKSTKSL 474

Query: 441 ALNIQRGERTLYLVV 455
           AL IQR    +++ V
Sbjct: 475 ALLIQRDGSQIFVPV 489