Pairwise Alignments

Query, 456 a.a., serine endoprotease DegQ from Vibrio cholerae E7946 ATCC 55056

Subject, 433 a.a., periplasmic serine protease, Do/DeqQ family from Kangiella aquimarina DSM 16071

 Score =  241 bits (614), Expect = 4e-68
 Identities = 148/405 (36%), Positives = 229/405 (56%), Gaps = 32/405 (7%)

Query: 39  PSLAPMLEKVTPAVVSIAVEGTQVSRQRLPDQFRFFFGPDFPTEQLQERPFRGLGSGVII 98
           P    ++EKV P++VSI V+  +  R                         R  GSG II
Sbjct: 31  PDFTELVEKVQPSIVSIQVDVVRWGRVA----------------------GRAGGSGFII 68

Query: 99  NADKGYVVTNYHVINGAEKIRVKLYDGREFDAELVGGDEMSDVALLKLNKAK-NLTEIRI 157
           + D+GY++TN+HVI+  + + VKLY+GREF AE++G D  +DVALLK+   K +L  +++
Sbjct: 69  D-DEGYILTNHHVIDNGDTVTVKLYNGREFKAEVIGSDANTDVALLKIEPGKQDLKALKL 127

Query: 158 ADSDKLRVGDFAVAIGNPFGLGQTVTSGIVSALGRSGLNIENFENFIQTDAAINSGNSGG 217
             SD L+VG++ +A G PF L QTVT+GIVSA GR  +  + +  FIQTD AIN GNSGG
Sbjct: 128 GTSDVLKVGEWVLAFGAPFNLEQTVTAGIVSAKGRGEVGSQ-YVPFIQTDVAINRGNSGG 186

Query: 218 ALVNLNGELIGINTAILGPNGGNVGIGFAIPSNMMKNLTDQILEFGEVKRGMLGVQGGEI 277
            LVNL GE++GIN+ +  P   + G+ F+IP ++  N+ +Q+LE G V RG LGV    I
Sbjct: 187 PLVNLEGEVVGINSMVFNPMISS-GLSFSIPIDLANNIREQLLESGVVNRGYLGVMFSSI 245

Query: 278 TSELADALGYESSKGAFVSQVVPDSAADKAGIKAGDIITSLNGKKIDTFSELRAKVATLG 337
             + ADA G +   G+ V +++P SAA+ AG++ GD++ +++GK +    +L   V    
Sbjct: 246 DQDRADAFGLKEVSGSLVRRILPGSAAEAAGLQEGDVVIAVDGKPVRKAQDLPYYVGQKM 305

Query: 338 AGKTITLGVLRDGKNQNIDVTLGEQQNAKTKAESLHQGLSGAELSNTTDS-----DPIQG 392
            G T+ L V+R+GK   ID  L +  + +T + +  Q   G  +    D         QG
Sbjct: 306 PGDTVKLDVIRNGKEIEIDAVLTD-SSGRTASINGGQDKLGIRVQALRDDLQEAYGIRQG 364

Query: 393 VKVTEVQKGSAAESYQLQKDDIIIGVNRKRVKNIAELRAIMEKSP 437
           V V++V + S A    +Q  DII  +++  ++ + + +  +   P
Sbjct: 365 VVVSDVAEQSPAAQAGIQNGDIIQKLHQTPIRTLEDYQRALASLP 409



 Score = 42.0 bits (97), Expect = 4e-08
 Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 4/105 (3%)

Query: 255 LTDQILEFGEVKRGM--LGVQGGEITSELADALGYESSKGAFVSQVVPDSAADKAGIKAG 312
           LTD       +  G   LG++   +  +L +A G    +G  VS V   S A +AGI+ G
Sbjct: 327 LTDSSGRTASINGGQDKLGIRVQALRDDLQEAYGIR--QGVVVSDVAEQSPAAQAGIQNG 384

Query: 313 DIITSLNGKKIDTFSELRAKVATLGAGKTITLGVLRDGKNQNIDV 357
           DII  L+   I T  + +  +A+L     + L V R G+  +  V
Sbjct: 385 DIIQKLHQTPIRTLEDYQRALASLPEKGKVALLVARPGRGSDFFV 429