Pairwise Alignments

Query, 456 a.a., serine endoprotease DegQ from Vibrio cholerae E7946 ATCC 55056

Subject, 486 a.a., Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  232 bits (592), Expect = 2e-65
 Identities = 153/409 (37%), Positives = 232/409 (56%), Gaps = 25/409 (6%)

Query: 46  EKVTPAVVSIA-VEGTQVSRQRLPDQFRFFFGPDFPTEQLQERPFRGLGSGVIINADKGY 104
           E+ T +VV I    GT   R  +   F +FFGP   + Q         GSGVI + D GY
Sbjct: 74  ERSTESVVFIKNFSGTDYRRYSI---FDYFFGPQGGSPQRVST-----GSGVIFSED-GY 124

Query: 105 VVTNYHVINGAEKIRVKLYDGREFDAELVGGDEMSDVALLKLNKAKNLTEIRIADSDKLR 164
           ++TN HV+  AE + V ++  + + A+L+G D  +D+A+LK++ A+ L  I+   S  L+
Sbjct: 125 IITNNHVVEDAETLEV-IHQKKTYKAKLIGTDPNTDIAVLKVD-AEGLPAIKKGSSRDLQ 182

Query: 165 VGDFAVAIGNPFGLGQTVTSGIVSALGRSGLNIEN----FENFIQTDAAINSGNSGGALV 220
           +G++ +A+GNPF L  TVT+GIVSA  R  +NI       E+FIQTDAAIN GNSGGALV
Sbjct: 183 IGEWVIAVGNPFNLTSTVTAGIVSAKERQ-INILGGDFPLESFIQTDAAINPGNSGGALV 241

Query: 221 NLNGELIGINTAILGPNGGNVGIGFAIPSNMMKNLTDQILEFGEVKRGMLGVQGGEITSE 280
           N+NGEL+GINTAIL   G   G GFA+P ++   + + ++ +GEV++ + GV   EIT E
Sbjct: 242 NVNGELVGINTAILSKTGTYTGYGFAVPVDIAAKIANDLINYGEVQKAIPGVSTEEITPE 301

Query: 281 LADALGYESSKGAFVSQVVPDSAADKAGIKAGDIITSLNGKKIDTFSELRAKVATLGAGK 340
           +A+ +G ES  G  V+ ++ + AA+KAG++ GDII  ++  +++        ++    G 
Sbjct: 302 IAEKMGLESLDGVIVNHIIRNGAAEKAGMEVGDIIIGIDDTEVNGKGSFEEALSYHYPGD 361

Query: 341 TITLGVLRDGKNQNIDVTLGEQQNAKTKAES--LHQGLSGAELS--NTTDSDPIQ---GV 393
            +TL  LR+ K +  D+TL   Q      E       L GA+L   NT D D  +   GV
Sbjct: 362 QVTLRYLRENKQKRADITLQNLQGGTGVIEKAFFSSALLGAKLEAVNTVDKDRYEIDYGV 421

Query: 394 KVTEVQKGSAAESYQLQKDDIIIGVNRKRVKNIAELRAIMEKSPNILAL 442
           K+T + +G  +E   L    I+  VN +  ++  E+   +E+    L L
Sbjct: 422 KITALTRGYLSE-LGLGNGFILTEVNGEPAEDPDEIGTFLEEYSGRLVL 469