Pairwise Alignments

Query, 456 a.a., serine endoprotease DegQ from Vibrio cholerae E7946 ATCC 55056

Subject, 495 a.a., periplasmic serine protease, Do/DeqQ family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  236 bits (602), Expect = 1e-66
 Identities = 155/410 (37%), Positives = 236/410 (57%), Gaps = 25/410 (6%)

Query: 46  EKVTPAVVSIAVEGTQVSRQRLPDQFRFFFGPDFPTEQLQERPFRGL--GSGVIINADKG 103
           ++V PAVV I  + T   R R  +    FF   +P +  Q+ P  G+  GSGVII+ D G
Sbjct: 67  DQVLPAVVHIKSKVTMQRRGRSGNPLEEFFEFRYP-DGGQQPPREGMSSGSGVIIS-DDG 124

Query: 104 YVVTNYHVINGAEKIRVKLYDGREFDAELVGGDEMSDVALLKLNKAKNLTEIRIADSDKL 163
           Y+VTN HVI+ A++I++ LYD   +DA+++G D  +D+ALLK++ A +L  +   DSDK 
Sbjct: 125 YIVTNNHVIDDAKEIQITLYDNTNYDAKVIGTDPTTDLALLKID-ASDLPFVPFGDSDKT 183

Query: 164 RVGDFAVAIGNPFGLGQTVTSGIVSALGRSGLNIEN------FENFIQTDAAINSGNSGG 217
           +VG++ +A+GNPF L  TVT+GI+SA  R+   + N       E+F+QTDA +N GNSGG
Sbjct: 184 KVGEWVLAVGNPFDLTSTVTAGIISAKARNIGILRNENNNLQIESFLQTDAVVNRGNSGG 243

Query: 218 ALVNLNGELIGINTAILGPNGGNVGIGFAIPSNMMKNLTDQILEFGEVKRGMLGVQGGEI 277
           ALVNL GEL+GINTAI    G   G  FA+PS ++K + D +L++G V+RG+LG+Q  ++
Sbjct: 244 ALVNLAGELVGINTAIASQTGAFSGYAFAVPSAIVKKVMDDLLKYGTVQRGLLGIQIQDV 303

Query: 278 T--SELADALGYESSKGAFVSQVVPDSAADKAGIKAGDIITSLNGKKIDTFSELRAKVAT 335
           +   +  D L  ++++G +V QV  DS A++AG++ GDII  ++G +    S+L+  VA 
Sbjct: 304 SVAKQYLD-LDTKANQGVYVDQVNEDSGAEEAGLQKGDIIIEVDGVETTNVSKLQEMVAR 362

Query: 336 LGAGKTITLGVLRDGKNQNIDVTLGEQQNAKTKAESLHQGLSGAELSNTTDSD------- 388
              G  + L  LRDGK Q    TL +  +  TK     + L   E  + T  D       
Sbjct: 363 KRPGDRVALKYLRDGKAQETTATL-KNISGTTKVVKKAE-LKATEFESVTFKDLEVSLQE 420

Query: 389 --PIQGVKVTEVQKGSAAESYQLQKDDIIIGVNRKRVKNIAELRAIMEKS 436
              I+G  V         E    ++  +I  V R RV    +L+  ++++
Sbjct: 421 HLEIEGGAVINEIDNDKWEEAGAREGFVITHVGRDRVSGADDLKNKLQRN 470



 Score = 25.8 bits (55), Expect = 0.003
 Identities = 15/72 (20%), Positives = 35/72 (48%), Gaps = 1/72 (1%)

Query: 288 ESSKGAFVSQVVPDSAADKAGIKAGDIITSLNGKKIDTFSELRAKVATLGAGKTITLGVL 347
           E   GA ++++  D   ++AG + G +IT +   ++    +L+ K+      + + LG  
Sbjct: 423 EIEGGAVINEIDNDKW-EEAGAREGFVITHVGRDRVSGADDLKNKLQRNKGEEVMILGFY 481

Query: 348 RDGKNQNIDVTL 359
            +G+    ++ L
Sbjct: 482 PNGQKSYFEIKL 493