Pairwise Alignments

Query, 352 a.a., outer membrane-stress sensor serine endopeptidase DegS from Vibrio cholerae E7946 ATCC 55056

Subject, 479 a.a., serine peptidase from Pseudomonas simiae WCS417

 Score =  193 bits (491), Expect = 7e-54
 Identities = 105/271 (38%), Positives = 162/271 (59%), Gaps = 3/271 (1%)

Query: 77  QGLGSGVIVSEKGYIITNYHVVAQADQIVVALQDGRAAAAQLVGKDRRTDIAVLRVEGTG 136
           Q LGSG I+S  GYI+TN HV+A AD+I+V L D     A+LVG D R+D+A+L++EG  
Sbjct: 98  QSLGSGFIISSDGYILTNNHVIADADEILVRLADRSELKAKLVGTDPRSDVALLKIEGKD 157

Query: 137 LPVIPLNPDYHPKVGDVVLAIGNPYNLGQTTTFGIISATGRSSISADGRQAFIQTDAAIN 196
           LPV+ L      K G  V+AIG+P+    T T GI+SA GR S+  +    FIQTD  IN
Sbjct: 158 LPVLKLGKSQDLKAGQWVVAIGSPFGFDHTVTQGIVSAIGR-SLPNENYVPFIQTDVPIN 216

Query: 197 DGNSGGALVNTQGELVGINTASFQQATDLETYGISFAIPYSLASKIMTKIIADGRVIRGY 256
            GNSGG L N  GE+VGIN+  + ++      G+SFAIP  +A  +  ++ + G+V RG+
Sbjct: 217 PGNSGGPLFNLAGEVVGINSQIYTRSGGF--MGVSFAIPIDVAMDVSNQLKSGGKVSRGW 274

Query: 257 IGVDGQDINSMTSRLLGNEHVGGIIILGVDPNGPAARAGFLEQDILLKIDGKKINGRQNV 316
           +GV  Q++N   +   G +   G ++  +  +GPAA+ G    D++L ++G+ I    ++
Sbjct: 275 LGVVIQEVNKDLAESFGLDKPAGALVAQIQDDGPAAKGGLHVGDVILSMNGQPIVMSADL 334

Query: 317 TDTVTDLRPGTVVDFTLLRKGEEIVLPVTIG 347
              V  L+ G+     ++R+G+   + +T+G
Sbjct: 335 PHLVGALKAGSKAKLEVIREGKRQTVELTVG 365



 Score = 29.3 bits (64), Expect = 2e-04
 Identities = 17/70 (24%), Positives = 32/70 (45%), Gaps = 1/70 (1%)

Query: 279 GIIILGVDPNGPAARAGFLEQDILLKIDGKKINGRQNVTDTVTDLRPGTVVDFTLLRKGE 338
           G++I  V  +GPA+  G    D++  ++ + I+  +  TD    L     V   +LR+G 
Sbjct: 411 GVVIKEVQ-DGPASLIGLQPGDVITHLNNQAIDSTKQFTDIAKALPKNRSVSMRVLRQGR 469

Query: 339 EIVLPVTIGE 348
              +   + E
Sbjct: 470 ASFITFKLAE 479