Pairwise Alignments

Query, 352 a.a., outer membrane-stress sensor serine endopeptidase DegS from Vibrio cholerae E7946 ATCC 55056

Subject, 386 a.a., Outer membrane stress sensor protease DegS from Variovorax sp. SCN45

 Score =  233 bits (593), Expect = 8e-66
 Identities = 141/334 (42%), Positives = 198/334 (59%), Gaps = 18/334 (5%)

Query: 30  LMPVVEQPRNIGALQISFNEAV--RKAAPAVVNIYNRKYSEN--------------DRRK 73
           ++ VV+ P    A+    + AV  +KA+PAVV+I   K ++               D+  
Sbjct: 40  VVSVVQAPTANPAIATPGSLAVPAKKASPAVVSINTSKAAQRHPRSNDPWFRFFFGDQDD 99

Query: 74  LSIQGLGSGVIVSEKGYIITNYHVVAQADQIVVALQDGRAAAAQLVGKDRRTDIAVLRVE 133
               GLGSGVIVS  GYI+TN HVV  AD+I V L D R A  +++G D  TD+AVL++E
Sbjct: 100 QPQVGLGSGVIVSTDGYILTNNHVVEGADEIEVTLNDSRHARGKVIGTDPDTDLAVLKIE 159

Query: 134 GTGLPVIPLNPDYHPKVGDVVLAIGNPYNLGQTTTFGIISATGRSSISADGRQAFIQTDA 193
              LPVI L      +VGD VLAIGNP+ +GQT T GI+SA GR+ +  +  + FIQTDA
Sbjct: 160 LDKLPVIVLGDSDALQVGDQVLAIGNPFGVGQTVTSGIVSALGRNQLGINNFENFIQTDA 219

Query: 194 AINDGNSGGALVNTQGELVGINTASFQQATDLETYGISFAIPYSLASKIMTKIIADGRVI 253
           AIN GNSGGAL++  G L GINTA + ++    + GI FAIP S+A  ++  I+ +G+V 
Sbjct: 220 AINPGNSGGALIDVHGNLQGINTAIYSRSGG--SMGIGFAIPVSMAKIVLEGIVKEGQVR 277

Query: 254 RGYIGVDGQDINSMTSRLLGNEHVGGIIILGVDPNGPAARAGFLEQDILLKIDGKKINGR 313
           RG+IGV+  D++   +   G +   G+II GV  NGPAA+AG    D++  +  KK +  
Sbjct: 278 RGWIGVEPSDLSPELAETFGVKADSGVIITGVLQNGPAAKAGIRPGDVITSVGEKKTDNV 337

Query: 314 QNVTDTVTDLRPGTVVDFTLLRKGEEIVLPVTIG 347
           Q +   V  L+PG+   F L R  +++ L VT G
Sbjct: 338 QALLTAVAGLKPGSTSRFALQRGSDKMELDVTPG 371