Pairwise Alignments

Query, 352 a.a., outer membrane-stress sensor serine endopeptidase DegS from Vibrio cholerae E7946 ATCC 55056

Subject, 495 a.a., Serine protease from Variovorax sp. SCN45

 Score =  189 bits (479), Expect = 2e-52
 Identities = 103/281 (36%), Positives = 162/281 (57%), Gaps = 3/281 (1%)

Query: 68  ENDRRKLSIQGLGSGVIVSEKGYIITNYHVVAQADQIVVALQDGRAAAAQLVGKDRRTDI 127
           +  +R + ++  GSG IV   G IITN HVV  A ++ V L D R   A+++G D +TDI
Sbjct: 113 QQQQRDVPVRAQGSGFIVDPSGIIITNAHVVKDAKEVTVKLTDRREFRAKVLGADAKTDI 172

Query: 128 AVLRVEGTGLPVIPLNPDYHPKVGDVVLAIGNPYNLGQTTTFGIISATGRSSISADGRQA 187
           AVL+++   LPV+ L      KVG+ VLAIG+P+    T T G++SA GR S+  D    
Sbjct: 173 AVLKIDAKNLPVLALGNTKDLKVGEWVLAIGSPFGFENTVTAGVVSAKGR-SLPDDSYVP 231

Query: 188 FIQTDAAINDGNSGGALVNTQGELVGINTASFQQATDLETYGISFAIPYSLASKIMTKII 247
           FIQTD A+N GNSGG L+NT+GE+VGIN+  + ++   +  G+SFAIP  +A ++  +I+
Sbjct: 232 FIQTDVAVNPGNSGGPLLNTRGEVVGINSQIYSRSGGYQ--GLSFAIPIDVAIQVKDQIV 289

Query: 248 ADGRVIRGYIGVDGQDINSMTSRLLGNEHVGGIIILGVDPNGPAARAGFLEQDILLKIDG 307
           A G+   G +GV  Q++N   +     +   G ++  ++  GP  +AG    D++ K++G
Sbjct: 290 ATGKATHGRLGVAVQEVNQAFADSFKLDKPEGALVSNIEKGGPGDKAGLKAGDVIRKVNG 349

Query: 308 KKINGRQNVTDTVTDLRPGTVVDFTLLRKGEEIVLPVTIGE 348
           + I    ++   +    PG  V   + R+GE   L   +G+
Sbjct: 350 QPIISSGDLPAVIGQQAPGKQVTLEVWRQGERQELQAKLGD 390



 Score = 33.9 bits (76), Expect = 9e-06
 Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 7/101 (6%)

Query: 248 ADGRVIRGYIGVDGQDINSMTSRLLGNEHVGGIIILGVDPNGPAARAGFLEQDILLKIDG 307
           AD  V +G +G+  + +     R    ++  G++I   D  GP+A AG    D+LL I+G
Sbjct: 401 ADADVGQGKLGLALRPLQPQEKREASVDN--GLLI--EDAAGPSALAGVQAGDVLLAING 456

Query: 308 KKINGRQNVTDTVTDLRPGTVVDFTLLRKGEE-IVLPVTIG 347
                 + V + V      +V    L+++GE+ I +PV IG
Sbjct: 457 TPAQSVEQVREVVAKATNKSVA--LLIQRGEDKIFVPVRIG 495