Pairwise Alignments

Query, 352 a.a., outer membrane-stress sensor serine endopeptidase DegS from Vibrio cholerae E7946 ATCC 55056

Subject, 456 a.a., serine endoprotease DegQ from Vibrio cholerae E7946 ATCC 55056

 Score =  209 bits (531), Expect = 1e-58
 Identities = 133/358 (37%), Positives = 194/358 (54%), Gaps = 24/358 (6%)

Query: 13  LLAAIAIIMVTPSLRAKLMPVVEQPRNIGALQI-SFNEAVRKAAPAVVNI---------- 61
           LL   A+ +   ++ + L      P ++   QI S    + K  PAVV+I          
Sbjct: 6   LLVLTALSLSLSAILSPLPATAALPLSVNGEQIPSLAPMLEKVTPAVVSIAVEGTQVSRQ 65

Query: 62  ---------YNRKYSENDRRKLSIQGLGSGVIVS-EKGYIITNYHVVAQADQIVVALQDG 111
                    +   +     ++   +GLGSGVI++ +KGY++TNYHV+  A++I V L DG
Sbjct: 66  RLPDQFRFFFGPDFPTEQLQERPFRGLGSGVIINADKGYVVTNYHVINGAEKIRVKLYDG 125

Query: 112 RAAAAQLVGKDRRTDIAVLRV-EGTGLPVIPLNPDYHPKVGDVVLAIGNPYNLGQTTTFG 170
           R   A+LVG D  +D+A+L++ +   L  I +      +VGD  +AIGNP+ LGQT T G
Sbjct: 126 REFDAELVGGDEMSDVALLKLNKAKNLTEIRIADSDKLRVGDFAVAIGNPFGLGQTVTSG 185

Query: 171 IISATGRSSISADGRQAFIQTDAAINDGNSGGALVNTQGELVGINTASFQQATDLETYGI 230
           I+SA GRS ++ +  + FIQTDAAIN GNSGGALVN  GEL+GINTA      +    GI
Sbjct: 186 IVSALGRSGLNIENFENFIQTDAAINSGNSGGALVNLNGELIGINTAIL--GPNGGNVGI 243

Query: 231 SFAIPYSLASKIMTKIIADGRVIRGYIGVDGQDINSMTSRLLGNEHVGGIIILGVDPNGP 290
            FAIP ++   +  +I+  G V RG +GV G +I S  +  LG E   G  +  V P+  
Sbjct: 244 GFAIPSNMMKNLTDQILEFGEVKRGMLGVQGGEITSELADALGYESSKGAFVSQVVPDSA 303

Query: 291 AARAGFLEQDILLKIDGKKINGRQNVTDTVTDLRPGTVVDFTLLRKGEEIVLPVTIGE 348
           A +AG    DI+  ++GKKI+    +   V  L  G  +   +LR G+   + VT+GE
Sbjct: 304 ADKAGIKAGDIITSLNGKKIDTFSELRAKVATLGAGKTITLGVLRDGKNQNIDVTLGE 361