Pairwise Alignments

Query, 352 a.a., outer membrane-stress sensor serine endopeptidase DegS from Vibrio cholerae E7946 ATCC 55056

Subject, 492 a.a., putative periplasmic serine endoprotease DegP-like from Pseudomonas putida KT2440

 Score =  202 bits (515), Expect = 1e-56
 Identities = 114/288 (39%), Positives = 169/288 (58%), Gaps = 3/288 (1%)

Query: 60  NIYNRKYSENDRRKLSIQGLGSGVIVSEKGYIITNYHVVAQADQIVVALQDGRAAAAQLV 119
           N+  +  S    R+   Q LGSG I+S  GY++TN HVVA AD+I+V L D     A+LV
Sbjct: 96  NMPQQPRSPRGDRQREAQSLGSGFIISSDGYVLTNNHVVADADEIIVRLSDRSELQAKLV 155

Query: 120 GKDRRTDIAVLRVEGTGLPVIPLNPDYHPKVGDVVLAIGNPYNLGQTTTFGIISATGRSS 179
           G D RTD+A+L+V+G  LP + L      KVG+ VLAIG+P+    + T GI+SA GR +
Sbjct: 156 GTDPRTDVALLKVDGKNLPTVKLGDSEKLKVGEWVLAIGSPFGFDHSVTKGIVSAKGR-T 214

Query: 180 ISADGRQAFIQTDAAINDGNSGGALVNTQGELVGINTASFQQATDLETYGISFAIPYSLA 239
           +  D    FIQTD AIN GNSGG L N +GE+VGIN+  F ++      G+SFAIP  +A
Sbjct: 215 LPNDTYVPFIQTDVAINPGNSGGPLFNMKGEVVGINSQIFTRSGGF--MGLSFAIPIDVA 272

Query: 240 SKIMTKIIADGRVIRGYIGVDGQDINSMTSRLLGNEHVGGIIILGVDPNGPAARAGFLEQ 299
             +  ++  DG+V RG++GV  Q++N   +   G +   G ++  V  NGPAA+ G    
Sbjct: 273 IDVSNQLKKDGKVSRGWLGVVIQEVNKDLAESFGLDKPAGALVAQVLENGPAAKGGLQVG 332

Query: 300 DILLKIDGKKINGRQNVTDTVTDLRPGTVVDFTLLRKGEEIVLPVTIG 347
           D++L ++G+ I    ++   V  L+ G      ++R G+   L +++G
Sbjct: 333 DVILSMNGQPIVMSADLPHLVGGLKDGEKAKLEIIRNGKRQNLDISVG 380



 Score = 34.3 bits (77), Expect = 7e-06
 Identities = 23/92 (25%), Positives = 42/92 (45%), Gaps = 3/92 (3%)

Query: 257 IGVDGQDINSMTSRLLGNEHVGGIIILGVDPNGPAARAGFLEQDILLKIDGKKINGRQNV 316
           +GV   D+ +   + L  E  GG++I  V  +GPAA  G    D++  ++ + I   +  
Sbjct: 404 LGVSVADLTAEQKKSL--ELKGGVVIKEVQ-DGPAAMIGLRPGDVISHLNNQAIGSAKEF 460

Query: 317 TDTVTDLRPGTVVDFTLLRKGEEIVLPVTIGE 348
           T+   +L     V   +LR+G    +   + E
Sbjct: 461 TEIAKELPKNRSVSMRVLRQGRASFITFKLAE 492