Pairwise Alignments

Query, 352 a.a., outer membrane-stress sensor serine endopeptidase DegS from Vibrio cholerae E7946 ATCC 55056

Subject, 402 a.a., quality control serine endoprotease DegS from Pseudomonas putida KT2440

 Score =  241 bits (614), Expect = 3e-68
 Identities = 139/370 (37%), Positives = 218/370 (58%), Gaps = 26/370 (7%)

Query: 2   LKFWVRSISLGLLAAIAIIMVTPS---LRAKLMPVVEQPRNIGALQ--ISFNEAVRKAAP 56
           L+++   +  G+L A+ II   P    L ++ + + + P+    +Q  +S+ +AV  AAP
Sbjct: 21  LRYFGWPLLTGILIAMLIIQRFPQWVGLPSQDVNLQQAPQTTRIMQGPVSYADAVTLAAP 80

Query: 57  AVVNIYNRK------------------YSEN-DRRKLSIQGLGSGVIVSEKGYIITNYHV 97
           AV N+Y  K                  + +N  +++     LGS VI+S +GY++TN HV
Sbjct: 81  AVANLYTTKVVNKSAHPLFEDPQFRRFFGDNLPKQRRWESSLGSAVIMSPEGYLLTNNHV 140

Query: 98  VAQADQIVVALQDGRAAAAQLVGKDRRTDIAVLRVEGTGLPVIPLNPDYHPKVGDVVLAI 157
            + ADQIVVAL+DGR   A+++G D  TD+AVL+++   LP I +       +GDV LAI
Sbjct: 141 TSGADQIVVALKDGRETLARVIGSDPETDLAVLKIDLKNLPAITIGRSDTIHIGDVSLAI 200

Query: 158 GNPYNLGQTTTFGIISATGRSSISADGRQAFIQTDAAINDGNSGGALVNTQGELVGINTA 217
           GNP+ +GQT T GIISATGR+ +  +  + FIQTDAAIN GNSGGALV+  G L+GINTA
Sbjct: 201 GNPFGVGQTVTMGIISATGRNQLGLNNYEDFIQTDAAINPGNSGGALVDANGNLIGINTA 260

Query: 218 SFQQATDLETYGISFAIPYSLASKIMTKIIADGRVIRGYIGVDGQDINSMTSRLLGNEHV 277
            F ++    + GI FAIP  LA ++M  I+  G+VIRG++G++ Q ++   +   G +  
Sbjct: 261 IFSKSGG--SQGIGFAIPVKLALEVMKSIVEHGQVIRGWLGIEVQPLSQELAESFGMKDR 318

Query: 278 GGIIILGVDPNGPAARAGFLEQDILLKIDGKKINGRQNVTDTVTDLRPGTVVDFTLLRKG 337
            GI++ G+   GPAA+AG    D++L I+G+     +   + V  ++P   +   ++R G
Sbjct: 319 PGIVVAGIFREGPAAKAGLHLGDVILSINGEPAGDGRKSMNQVARIKPNEKITIEVMRNG 378

Query: 338 EEIVLPVTIG 347
           +++ L   +G
Sbjct: 379 QQLKLIAEVG 388