Pairwise Alignments

Query, 352 a.a., outer membrane-stress sensor serine endopeptidase DegS from Vibrio cholerae E7946 ATCC 55056

Subject, 502 a.a., DegQ family serine endoprotease from Paraburkholderia sabiae LMG 24235

 Score =  203 bits (516), Expect = 9e-57
 Identities = 110/271 (40%), Positives = 159/271 (58%), Gaps = 5/271 (1%)

Query: 78  GLGSGVIVSEKGYIITNYHVVAQADQIVVALQDGRAAAAQLVGKDRRTDIAVLRVEGTGL 137
           G+GSG I+S  GY++TN HV+  AD I V L D R   A+L+G D RTD+AV+++    L
Sbjct: 123 GVGSGFILSSDGYVMTNAHVIDDADTIYVTLTDKREFKAKLIGVDDRTDVAVVKINAANL 182

Query: 138 PVIPLNPDYHPKVGDVVLAIGNPYNLGQTTTFGIISATGRSSISADGRQAFIQTDAAIND 197
           P +P+      +VG+ V+AIG+P+ L  T T GI+SA GR +        FIQTD A+N 
Sbjct: 183 PTVPIGDSNKVRVGEWVVAIGSPFGLENTVTAGIVSAKGRDT---GDYLPFIQTDVAVNP 239

Query: 198 GNSGGALVNTQGELVGINTASFQQATDLETYGISFAIPYSLASKIMTKIIADGRVIRGYI 257
           GNSGG L+N QGE++GIN+  + +       GISFAIP   A ++  ++   G+V RG I
Sbjct: 240 GNSGGPLINMQGEVIGINSQIYSRTGGF--MGISFAIPIDEAMRVADQLKTTGKVTRGRI 297

Query: 258 GVDGQDINSMTSRLLGNEHVGGIIILGVDPNGPAARAGFLEQDILLKIDGKKINGRQNVT 317
            V   ++    +  LG     G ++  V+P GPA +AG    DI+LK +G  ++   ++ 
Sbjct: 298 AVAIGEVTKDVADSLGLPKAQGALVSSVEPGGPADKAGVQPGDIILKFNGHNVDTATDLP 357

Query: 318 DTVTDLRPGTVVDFTLLRKGEEIVLPVTIGE 348
             V D +PGT    TL RKG+   +PVT+ E
Sbjct: 358 RMVGDTKPGTKATITLWRKGQTREVPVTVAE 388



 Score = 30.4 bits (67), Expect = 1e-04
 Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 9/84 (10%)

Query: 257 IGVDGQDI--NSMTSRLLGNEHVGGIIILGVDPNGPAARAGFLEQDILLKIDGKKINGRQ 314
           +GV   DI  + M S  L N    G+ +  VD  GPAAR G    DI+L++    I   +
Sbjct: 413 LGVAVSDIPADQMKSLKLHN----GVQVDAVD--GPAARVGLQRGDIILRVGDTDITSAK 466

Query: 315 NVTDTVTDLRPGTVVDFTLLRKGE 338
              +  + L    +V   L+R+GE
Sbjct: 467 QFEEVTSHLDASKMVAL-LVRRGE 489