Pairwise Alignments

Query, 352 a.a., outer membrane-stress sensor serine endopeptidase DegS from Vibrio cholerae E7946 ATCC 55056

Subject, 501 a.a., deoxyribonuclease HsdR from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  188 bits (477), Expect = 3e-52
 Identities = 113/299 (37%), Positives = 161/299 (53%), Gaps = 10/299 (3%)

Query: 56  PAVVNIYNRKYSENDRRKLSIQGLGSGVIVSEKGYIITNYHVVAQADQIVVALQDGRAAA 115
           P + + +   + E  + +   +  GSGVI++  GYI+TN HV+ +AD+I V   D R   
Sbjct: 97  PRLRDFFGDSFGERQQPRGPQKASGSGVIIATNGYIVTNNHVIDKADKIEVVFNDKRRLT 156

Query: 116 AQLVGKDRRTDIAVLRVEGTGLPVIPLNPDYHPKVGDVVLAIGNPYNLGQTTTFGIISAT 175
           A LVG D  TDIA+L+VE  GLP +        +VG+ VLA+GNP NL  T T GI+SA 
Sbjct: 157 ATLVGTDPTTDIALLKVEADGLPTVRYGNSDDLQVGEWVLAVGNPMNLTSTVTAGIVSAK 216

Query: 176 GRS--------SISADGRQAFIQTDAAINDGNSGGALVNTQGELVGINTASFQQATDLET 227
           GRS               ++FIQTDAA+N GNSGGALVN  G+LVGINTA   Q      
Sbjct: 217 GRSIDILRSNNPSQQYSVESFIQTDAAVNPGNSGGALVNLNGDLVGINTAIASQTGSFT- 275

Query: 228 YGISFAIPYSLASKIMTKIIADGRVIRGYIGVDGQDINSMTSRLLGNEHVGGIIILGVDP 287
            G SFA+P S+ SK++  ++  G V R  +G   Q+I++  ++      + G+ I GV  
Sbjct: 276 -GYSFAVPSSIVSKVVDDLMKYGEVQRALLGARIQEIDAAFAKENNIRTLNGVYIAGVAE 334

Query: 288 NGPAARAGFLEQDILLKIDGKKINGRQNVTDTVTDLRPGTVVDFTLLRKGEEIVLPVTI 346
              A  AG  E D++  ++G  +     + + V   RPG  V  + LR  +     VT+
Sbjct: 335 GSGAQEAGLREGDVVTAVNGVPVAKSSQLLEQVARYRPGDKVKVSYLRDNDAKTANVTL 393