Pairwise Alignments

Query, 352 a.a., outer membrane-stress sensor serine endopeptidase DegS from Vibrio cholerae E7946 ATCC 55056

Subject, 455 a.a., Outer membrane stress sensor protease DegQ, serine protease from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  203 bits (516), Expect = 8e-57
 Identities = 112/283 (39%), Positives = 172/283 (60%), Gaps = 4/283 (1%)

Query: 70  DRRKLSIQGLGSGVIV-SEKGYIITNYHVVAQADQIVVALQDGRAAAAQLVGKDRRTDIA 128
           D+     +GLGSGVI+ + KGY++TN HV+ QA +I + L DGR   A+ +G D ++DIA
Sbjct: 82  DQPSQPFEGLGSGVIIDAAKGYVLTNNHVINQAQKISIQLNDGREFDAKQIGGDDQSDIA 141

Query: 129 VLRVEGTG-LPVIPLNPDYHPKVGDVVLAIGNPYNLGQTTTFGIISATGRSSISADGRQA 187
           +L+++    L  I +      +VGD  +A+GNP+ LGQT T GIISA GRS ++ +G + 
Sbjct: 142 LLQIQNPSKLTQIAIADSDKLRVGDFAVAVGNPFGLGQTATSGIISALGRSGLNLEGLEN 201

Query: 188 FIQTDAAINDGNSGGALVNTQGELVGINTASFQQATDLETYGISFAIPYSLASKIMTKII 247
           FIQTDA+IN GNSGGAL+N  GEL+GINTA    A    + GI FAIP ++A  +  ++I
Sbjct: 202 FIQTDASINRGNSGGALLNLNGELIGINTAIL--APGGGSIGIGFAIPSNMAQTLAQQLI 259

Query: 248 ADGRVIRGYIGVDGQDINSMTSRLLGNEHVGGIIILGVDPNGPAARAGFLEQDILLKIDG 307
             G + RG +G+ G ++ +  ++        G  +  V PN  +A+AG    D+++ ++G
Sbjct: 260 QFGEIKRGLLGIKGTEMTADIAKAFKLNVQRGAFVSEVLPNSGSAKAGVKSGDVIISLNG 319

Query: 308 KKINGRQNVTDTVTDLRPGTVVDFTLLRKGEEIVLPVTIGEDT 350
           K++N    +   +    PGT V   LLR G+ + + VT+  +T
Sbjct: 320 KQLNSFAELRSRIATTEPGTKVKLGLLRDGKPLEVEVTLDSNT 362



 Score = 32.3 bits (72), Expect = 2e-05
 Identities = 44/225 (19%), Positives = 97/225 (43%), Gaps = 37/225 (16%)

Query: 148 PKVGDVVLAIGNPYNLGQTTTF----------GIISATGRSSISADGRQAF---IQTDAA 194
           P  G + +    P N+ QT             G++   G + ++AD  +AF   +Q  A 
Sbjct: 235 PGGGSIGIGFAIPSNMAQTLAQQLIQFGEIKRGLLGIKG-TEMTADIAKAFKLNVQRGAF 293

Query: 195 IND--GNSGGAL--VNTQGELVGINTASFQQATDLETYGISFAIPYSLASKIMTKIIADG 250
           +++   NSG A   V +   ++ +N        +L +  I+   P    +K+   ++ DG
Sbjct: 294 VSEVLPNSGSAKAGVKSGDVIISLNGKQLNSFAELRSR-IATTEP---GTKVKLGLLRDG 349

Query: 251 RVIRGYIGVDGQDINSMTSRLLGNEHVG-------------GIIILGVDPNGPAARAGFL 297
           + +   + +D    +S ++ ++     G             G+ +  V+ + PAA+AG  
Sbjct: 350 KPLEVEVTLDSNTSSSASAEMIAPALQGATLSDGQLKDGTKGVKVDSVEKSSPAAQAGLQ 409

Query: 298 EQDILLKIDGKKINGRQNVTDTVTDLRPGTVVDFTLLRKGEEIVL 342
           + D+++ ++  +I+    +   V   +P +++   ++R  E I L
Sbjct: 410 KDDVIIGVNRDRISSIAEMR-KVMAAKP-SIIALQVVRGNENIYL 452