Pairwise Alignments

Query, 352 a.a., outer membrane-stress sensor serine endopeptidase DegS from Vibrio cholerae E7946 ATCC 55056

Subject, 355 a.a., serine endoprotease, periplasmic (NCBI) from Escherichia coli BW25113

 Score =  335 bits (858), Expect = 1e-96
 Identities = 177/345 (51%), Positives = 238/345 (68%), Gaps = 2/345 (0%)

Query: 6   VRSISLGLLAAIAIIMVTPSLRAKLMPVVEQPRNIGALQISFNEAVRKAAPAVVNIYNRK 65
           +RS+++GL+    +++  PSLR+       Q  +      S+N AVR+AAPAVVN+YNR 
Sbjct: 6   LRSVAIGLIVGAILLVAMPSLRSLNPLSTPQFDSTDETPASYNLAVRRAAPAVVNVYNRG 65

Query: 66  YSENDRRKLSIQGLGSGVIVSEKGYIITNYHVVAQADQIVVALQDGRAAAAQLVGKDRRT 125
            + N   +L I+ LGSGVI+ ++GYIITN HV+  ADQI+VALQDGR   A LVG D  T
Sbjct: 66  LNTNSHNQLEIRTLGSGVIMDQRGYIITNKHVINDADQIIVALQDGRVFEALLVGSDSLT 125

Query: 126 DIAVLRVEGTG-LPVIPLNPDYHPKVGDVVLAIGNPYNLGQTTTFGIISATGRSSISADG 184
           D+AVL++  TG LP IP+N    P +GDVVLAIGNPYNLGQT T GIISATGR  ++  G
Sbjct: 126 DLAVLKINATGGLPTIPINARRVPHIGDVVLAIGNPYNLGQTITQGIISATGRIGLNPTG 185

Query: 185 RQAFIQTDAAINDGNSGGALVNTQGELVGINTASFQQATDLET-YGISFAIPYSLASKIM 243
           RQ F+QTDA+IN GNSGGALVN+ GEL+GINT SF ++ D ET  GI FAIP+ LA+KIM
Sbjct: 186 RQNFLQTDASINHGNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIM 245

Query: 244 TKIIADGRVIRGYIGVDGQDINSMTSRLLGNEHVGGIIILGVDPNGPAARAGFLEQDILL 303
            K+I DGRVIRGYIG+ G++I  + ++  G + + GI++  V P+GPAA AG    D+++
Sbjct: 246 DKLIRDGRVIRGYIGIGGREIAPLHAQGGGIDQLQGIVVNEVSPDGPAANAGIQVNDLII 305

Query: 304 KIDGKKINGRQNVTDTVTDLRPGTVVDFTLLRKGEEIVLPVTIGE 348
            +D K         D V ++RPG+V+   ++R  +++ L VTI E
Sbjct: 306 SVDNKPAISALETMDQVAEIRPGSVIPVVVMRDDKQLTLQVTIQE 350