Pairwise Alignments

Query, 352 a.a., outer membrane-stress sensor serine endopeptidase DegS from Vibrio cholerae E7946 ATCC 55056

Subject, 433 a.a., periplasmic serine protease, Do/DeqQ family from Kangiella aquimarina DSM 16071

 Score =  191 bits (486), Expect = 2e-53
 Identities = 112/306 (36%), Positives = 173/306 (56%), Gaps = 9/306 (2%)

Query: 47  FNEAVRKAAPAVVNIYNRKYSENDRRKLSIQGLGSGVIVSEKGYIITNYHVVAQADQIVV 106
           F E V K  P++V+I   +       +++ +  GSG I+ ++GYI+TN+HV+   D + V
Sbjct: 33  FTELVEKVQPSIVSI---QVDVVRWGRVAGRAGGSGFIIDDEGYILTNHHVIDNGDTVTV 89

Query: 107 ALQDGRAAAAQLVGKDRRTDIAVLRVEG--TGLPVIPLNPDYHPKVGDVVLAIGNPYNLG 164
            L +GR   A+++G D  TD+A+L++E     L  + L      KVG+ VLA G P+NL 
Sbjct: 90  KLYNGREFKAEVIGSDANTDVALLKIEPGKQDLKALKLGTSDVLKVGEWVLAFGAPFNLE 149

Query: 165 QTTTFGIISATGRSSISADGRQAFIQTDAAINDGNSGGALVNTQGELVGINTASFQQATD 224
           QT T GI+SA GR  + +     FIQTD AIN GNSGG LVN +GE+VGIN+  F     
Sbjct: 150 QTVTAGIVSAKGRGEVGSQ-YVPFIQTDVAINRGNSGGPLVNLEGEVVGINSMVFNP--- 205

Query: 225 LETYGISFAIPYSLASKIMTKIIADGRVIRGYIGVDGQDINSMTSRLLGNEHVGGIIILG 284
           + + G+SF+IP  LA+ I  +++  G V RGY+GV    I+   +   G + V G ++  
Sbjct: 206 MISSGLSFSIPIDLANNIREQLLESGVVNRGYLGVMFSSIDQDRADAFGLKEVSGSLVRR 265

Query: 285 VDPNGPAARAGFLEQDILLKIDGKKINGRQNVTDTVTDLRPGTVVDFTLLRKGEEIVLPV 344
           + P   A  AG  E D+++ +DGK +   Q++   V    PG  V   ++R G+EI +  
Sbjct: 266 ILPGSAAEAAGLQEGDVVIAVDGKPVRKAQDLPYYVGQKMPGDTVKLDVIRNGKEIEIDA 325

Query: 345 TIGEDT 350
            + + +
Sbjct: 326 VLTDSS 331



 Score = 26.2 bits (56), Expect = 0.002
 Identities = 17/68 (25%), Positives = 29/68 (42%), Gaps = 11/68 (16%)

Query: 279 GIIILGVDPNGPAARAGFLEQDILLKIDGKKINGRQNVTDTVTDL-----------RPGT 327
           G+++  V    PAA+AG    DI+ K+    I   ++    +  L           RPG 
Sbjct: 364 GVVVSDVAEQSPAAQAGIQNGDIIQKLHQTPIRTLEDYQRALASLPEKGKVALLVARPGR 423

Query: 328 VVDFTLLR 335
             DF +++
Sbjct: 424 GSDFFVIK 431