Pairwise Alignments

Query, 352 a.a., outer membrane-stress sensor serine endopeptidase DegS from Vibrio cholerae E7946 ATCC 55056

Subject, 455 a.a., Do family serine endopeptidase from Erwinia tracheiphila SCR3

 Score =  204 bits (518), Expect = 5e-57
 Identities = 138/359 (38%), Positives = 194/359 (54%), Gaps = 28/359 (7%)

Query: 13  LLAAIAIIMVTPSLRAKLMPVVEQPRNI-GALQISFNEAVRKAAPAVVNIY--------- 62
           LL+A+A+     S+ A  M +   P  I G    S    + K  PAVV+++         
Sbjct: 7   LLSALAL-STGLSMAATPMAMAALPAQIQGQPMPSLAPMLEKVLPAVVSVHVEGTQSQPQ 65

Query: 63  --------NRKYSENDRRKLSIQ-----GLGSGVIVS-EKGYIITNYHVVAQADQIVVAL 108
                    R + + D+   + Q     GL SGVI++ +KGYI+TN HV+  AD+I V L
Sbjct: 66  TQDIPEPLKRFFGQQDQNNEAAQPQPFEGLASGVIINADKGYILTNNHVINGADKISVQL 125

Query: 109 QDGRAAAAQLVGKDRRTDIAVLRVEGT-GLPVIPLNPDYHPKVGDVVLAIGNPYNLGQTT 167
            DGR   A+L+G D+ TDIA+L+V G  GL  I +      KVGD  +AIGNP+ LGQT 
Sbjct: 126 SDGREFDAKLIGHDQPTDIALLQVSGAKGLAQIKIADSDQLKVGDFAVAIGNPFGLGQTA 185

Query: 168 TFGIISATGRSSISADGRQAFIQTDAAINDGNSGGALVNTQGELVGINTASFQQATDLET 227
           T GIISA GRS ++ +G + FIQTDAAIN GNSGGALVN  GEL+GINTA    A+    
Sbjct: 186 TSGIISALGRSGLNLEGLENFIQTDAAINRGNSGGALVNLNGELIGINTAIL--ASSGGN 243

Query: 228 YGISFAIPYSLASKIMTKIIADGRVIRGYIGVDGQDINSMTSRLLGNEHVGGIIILGVDP 287
            GI FAIP ++A  +  ++I  G V RG +G+ G ++ +  ++    +   G  +  V P
Sbjct: 244 IGIGFAIPGNMAMNLAQQLIDFGEVRRGQLGIKGTEMTAEMAKTFKVDAQRGAFVNEVLP 303

Query: 288 NGPAARAGFLEQDILLKIDGKKINGRQNVTDTVTDLRPGTVVDFTLLRKGEEIVLPVTI 346
              A +AG    DI+  +D K +     +   +    PG  V   LLR G+ + L V +
Sbjct: 304 GSAALKAGIKAGDIITHLDDKPVESFAALRAKIGTTAPGKEVKLELLRDGKPMTLMVRL 362